Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0538 |
Symbol | |
ID | 8533665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 571921 |
End bp | 572604 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 646382919 |
Product | Radical SAM domain protein |
Protein accession | YP_003262439 |
Protein GI | 261855156 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0602] Organic radical activating enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0128544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTCAG CCTTGGACGA CATCGCCATA CAAGAGAAGG CTCCACTGCA GTTGCGGATT ACGGAGATAT TCCGCTCATT GCAGGGAGAA TCTGAAAGTG CAGGCTGGCC GACAGTGTTC GTGCGGCTTA CCGGGTGCCC GCTACGGTGC GTTTATTGTG ATACGGCTTA TGCTTTCACC GGCGGTGAGC GACTGAGTTT GTTGTCCATC CTCGACCAAG TTGCCGCATA CCATACTCAG GATGTCTGCG TAACAGGTGG CGAGCCGTTG GCTCAACCAG CCTGCCTGCC TTTGTTGACG TCGCTCTGTG ATGCTGGGCA TTTGGTCAGC CTGGAAACAA GTGGTGCACT TTCCATCGAA GGGGTTGATC CGCGGGTACG CGTGGTGATG GATCTGAAAA CGCCGAGTTC GGGTGAAGCT GAAAAGAATC GATTTGAGAA TATTGATCTG CTCAAAACCA GTGACGAAAT CAAATTTGTC ATTGGCAGTG CAGAAGACTT CAAGTGGGCA GTCCAGCATG TGCGCCAATT TCAGATGGAT AAACGATTTA ATGTTCTTAT ATCGCCCGTA TTTGGCCAGG TAACGCCGCT GGCGCTGGCT GATTGGATAC TGGAAAGCGG CTTGCGTCTG CGTTTTCAGC AACAGTTGCA CAAATTGATA TGGGGAAATG AGCCTGGACA CTGA
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Protein sequence | MISALDDIAI QEKAPLQLRI TEIFRSLQGE SESAGWPTVF VRLTGCPLRC VYCDTAYAFT GGERLSLLSI LDQVAAYHTQ DVCVTGGEPL AQPACLPLLT SLCDAGHLVS LETSGALSIE GVDPRVRVVM DLKTPSSGEA EKNRFENIDL LKTSDEIKFV IGSAEDFKWA VQHVRQFQMD KRFNVLISPV FGQVTPLALA DWILESGLRL RFQQQLHKLI WGNEPGH
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