| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0531 |
|---|
| Symbol | |
|---|
| ID | 8533658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 565881 |
|---|
| End bp | 566927 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 646382912 |
|---|
| Product | Holliday junction DNA helicase RuvB |
|---|
| Protein accession | YP_003262432 |
|---|
| Protein GI | 261855149 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
|---|
| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.899114 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATC GCGTCATTAC CGCAGAAAGT GTGACTGAAG ACGAGGCCAT CGAACGCGCC
TTGCGTCCCA AGCGGCTGGT CGATTACGTG GGCCAACCTG CGGTGGTCGA ACAGATGGAA
ATATTCATCC CGGCGGCGCG GCAACGGGGC GAAGCGTTGG ATCATGTGCT CATTTTCGGT
CCGCCGGGGC TTGGAAAAAC CACACTCGCC AATATCATTG CCCACGAGAT GGGCGTGGGT
CTCAAACAAA CATCGGGGCC GGTGCTTGAG CGTCCGGGTG ACTTGGCGGC GCTACTGACC
AATCTCGAAC CGAATGATGT GTTGTTCATC GATGAGATTC ACCGGCTTTC GGCCGTGGTG
GAAGAAATTC TCTACCCGGC GATGGAAGAC CATCAAATCG ACATCATGAT CGGCGAAGGA
CCTGCTGCGC GTTCGATCAA GCTCGATTTG CCGCCGTTTA CCCTTGTTGG CGCCACAACT
CGTGCGGGGA TGCTGACCGG CCCGCTGCGA GATCGGTTCG GCATTATTCA GCGTCTGGAA
TTTTATTCAG TGGCGGATTT AACCCGCATT GTTAGTCGAT CCGCCCAACT GATGGGCGTC
TCGATTGATG CTGGCGGTGC GCAAGAAATT GCAGCTCGGG CGCGAGGCAC GCCGCGAATT
GCGAACCGCC TTTTGCGCCG CGTTCGCGAT TTTGCTGAAG TCCGGGGCAA TGGCACGGTT
GATCAGCCGA TGGCGAACGC GGCACTAGAT TTGTTGCAGG TGGATGCGCG CGGGTTTGAT
CAGCAGGATC GACGTCTGCT CGAAGCCTTG ATTCACAAGT TCGATGGCGG CCCGGTCGGT
CTGGATAACA TTGCCGCCGC CATCGGTGAG GCGCGCGATA CGATTGAAGA CGTGCTGGAA
CCGTTCCTCA TTCAGCAAGG TTTTCTGGTG CGCACGGCAC GAGGGCGGAT GGCAACGCGC
CAGACTTATG CCCACTTCGG TTTCCGTCCG CCCAGTGCGT TCGAGTCGCA GCAAGGCACA
TTGCTGCCTG AGGAGGAACC GCAGTGA
|
|---|
| Protein sequence | MTDRVITAES VTEDEAIERA LRPKRLVDYV GQPAVVEQME IFIPAARQRG EALDHVLIFG
PPGLGKTTLA NIIAHEMGVG LKQTSGPVLE RPGDLAALLT NLEPNDVLFI DEIHRLSAVV
EEILYPAMED HQIDIMIGEG PAARSIKLDL PPFTLVGATT RAGMLTGPLR DRFGIIQRLE
FYSVADLTRI VSRSAQLMGV SIDAGGAQEI AARARGTPRI ANRLLRRVRD FAEVRGNGTV
DQPMANAALD LLQVDARGFD QQDRRLLEAL IHKFDGGPVG LDNIAAAIGE ARDTIEDVLE
PFLIQQGFLV RTARGRMATR QTYAHFGFRP PSAFESQQGT LLPEEEPQ
|
|---|
| |