| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0518 |
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| Symbol | |
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| ID | 8533645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 549930 |
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| End bp | 556457 |
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| Gene Length | 6528 bp |
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| Protein Length | 2175 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646382899 |
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| Product | CheA signal transduction histidine kinase |
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| Protein accession | YP_003262419 |
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| Protein GI | 261855136 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACAG AATCAAAGGT GGACTCAATT GTTCTCGATC GGCTCAAGGA AGGGCTCAAT
GAGAAAATCG ATCAGTTACT GCGTGCACTT GAAGATTTGA GCAGCGGTGC GGGCGGTAAT
GAACTCGTTT TCGAGTCCTT GGATGCCGTC AAAGCAATCG ACGCTGTTCT GGCTGTCTCC
GATTACCAAC TTTTGCGCGT CATGCTCAAA GAGCAGATGT CCGCACTCAC TCAGCTCGAA
ACCAATCCGG AAAAAGCAGC TGTGCTTGTC ACCACAGTGA CCGAAGCGGC ATGGATGCTG
CGTGCTTTGC TGGATCGATT GAGTGTTGGT GCGACAGTAA ACGCCATGAG TTTGCTCCCG
ATGATCAATC GATTGAGACA ATCTCAAGGG CTCTCGGAAG TCGATACGGA AAATGTGTTG
GCGCGTTCGA CCGTTCTCTG GTCGGAGAGT CGAGTCTTCG TCAATCCCTA TGTCGGGCAG
ATTGCCGCCA AATCGGAAGA GAAGACCAAG TCGAATCAAT TGCTTGCTTC CATGGAGCAA
CAAATTCTTC TGCTGATGCG TGGCGATGTA ACCGCGATCC CTGGATTGAT CGAAACGTTT
GATCGGATTA TCGAGCGGGA AGTTAATAGA GCGGTGGTTG TGGCTACGCG TTCCTTTGAA
GAATTGCTGG GCGCAGTTCA CCAAGATCAG GAACGTTATT TGCCTTTGGC CAAGCGCATG
ATCGGGCGAG TACTCCGATT GTTCCGAATG GAAATCCAGG GGCGTGACTC TCTGCATATT
CGTTTCGAAG CAATTGAATT TGCCACAGAT ATGCTCCTTG AGTTGGTTCG TGTGTTGCCG
GACGACAGCG AGTTATGTGG TGAGCGCGTC AGTAACTGGC ACGAGCTACT TTCTACCGAT
GGTGAGCGTG TCCGCTTCCT CGGGTTAGAA ACCTCCGCTT TGACACAGGT TGCACAAGTG
CTCTCAGAAG AGCTGAACGC GGCTCAAGAT GTGCTTGATT TGTTTGTCCG AGGCGCCAAG
AGTGATCTTG AGCCGTTGGT CCGTATTCAA CCAAGACTCG AGCAAATTGT CGGTGTGCTC
GCTGCATTGA ATTACGAGCA TGAGTCCGGA TTGATTCAAG GTGCATTGGA ACAGCTGATT
CAGGTGACGC GCGGAAGCGT TCTGTTCGAT GATGATTTCC TGATGCAACT GGCCGTGGCG
ATCATGACGA CAGAACAAGT TGTGTCGCAA ATCGGGCACT TGATCGTGGA TGACAGCAAG
TCATTAACAT CGGTCGATCG CGTTGTTTCC GAAGCACTTA TCCCGCTTGC CACCGCATGT
TATGAGGATG TCATCGCCTC CAAGGAAGCG GTGAATATGG CATTGAGGCC AACCGGTCAA
CCGGTGGCTC CAGATACACT TACAAATGCA GCTCGTTTGA TTGCTGGCGT GCGTAATGTG
CTGGAAATGG CAGAGCTGCG AGCCGCGATG CCTTTGATCA ATGGCTTGCA CCGTTGGCTT
TTTCTGCATG TCAATAATCT GCAACTCGTG CGATCTGAGA CTATTTCAGC GCTTGCCGAA
GTGTCGGCGG CCGTTGAGTT CTATCTCGAA AATTTGCGGG ACCATCAGAA AGAGATGGTG
CAGTTTTTGG ACGGTGCCTT GCAGATGTTG CCTGTCTTGA ACGGGGGCAC AGAAGCGCAC
GAAGGCGAGC AGCCAAGAGA AACCCTCGAA CCGCAAAATC ACAATCTTGA CGTACAAACG
TCGATTGACG AAGAGCCCCA GCAGCCAGTG GATGAGTCCT TGGCCAGCAT GGATGAGCTT
ATTGCACAAT TATCCATGCC GAACTCAGAC GAGTTTGTTG AAGAGGCGGA AGTTGCCACA
GCCCTTCATG GTGAAGAAAC GGCCGTTGAT GCGATGCCGT TAGAAACACT CGACCCGCCT
GAAGATTCAG ACACGGCGCC AATTGAAGCC GGTGAGCTCC AGGCGCCAGA ACTCGTGCTG
GATGAGAATT TTGTGCTCGA TGTTTCTGAA GAAACTCATT CTGGTGAAGA TGCAGATGTG
CTCTCTCAAT CAGCGCGCGA GCCGGAAACT GCATTTCTGG CACCCGACAC CATCGAGGCA
ATACCGGCAG AAGAGCCATC GACCGAGCCG ATGGTTGAGT CTGTCGAGGA CAACGCGCAT
CTTGGGAACT TTGATCTGAT AGAGCATCAG CACGAAGCAG CGTCGGGCGA GGAACCGGCT
GGTGAAGCGT CGCAAGTTAA AGCAGATGCT GAATTCGATC TGCCTGCGGC GTGGGCAGCG
GAGCTGTCAC TCGATCTGGA GCAAGATGAA CCTGTTTTTG AACAGAAATC TGCCGAGACA
CCGGTAGCGG AAGACGAGCC GCTGCCAGAC TTTGAGACAC TCGATCTGTC TTTGCCTCCA
TCTGAGAAGG AACCCGTTGA ATCAACAACT GAATGGTCCT TCCTGCAGAA TGCTTCCGAT
TCAGACATTG ATTTGACATT GCCGCCGAGT GACCCACAGT CACCTGAGCA TCCCTCCTTT
CTGGAAGAGC CCTTCAATTC TGATCTGTCA CTTGACGCAC TCTCATTGCC GGATATTGAA
CAAGCACCTG GTCGTGCGCC GGAATCAGAG ACTGGAATGG TATCTGATGC TGAGGTGGGA
GAATCCAGTG CCCCTTCGGC AACCCCAGAG TTTGAAGAAA CGCTGGATGA ACTAGCGATC
GAGATGCGGG AAGTTTTTGC AGAAGAGATG CAAGAAGAGT TGCCCGCGTT GCTGGAAGCG
GCCCGAACTT GGTCCAACCA GGGTGGTCGA GATCATCTGG TTACGCTCCG TCGTGGTTTT
CACACCATAA AGGGTAGTAG CCGGATGGTT GGTTTGACTG CCATCGGTGA TTGGGGGTGG
TCATACGAGC ATCTGCTGAA TCAAGTGCTG GACGACCGAG TAACCAGCAC GCCTGCGTTG
CGTGCCGATG TGCTCTCGGC CGTCTCGCTC ATGAACGAGG CATTGCCTGT CCTATCTCAG
GGACAATGCC CGCCCGTGTC GTATTGGCAG GAATCTTTGG GGTGGGCTGA GGCTTGGAGC
AATGATCAGT CGAAGGATGG GGCCGCCTCC GAATCCGCCA TTACGGAATC CGCTCCTGAA
GCTGAAACCC TGGTTGCAGA AGCAGATGTG CCGACGGTTG AGTCGCACGA ATGGGTTCAA
GATGCACCCT CTGAGGTTGA CGAAAACATC CTTGAAAAGT TCGCGCCTTC AGAAGAAATA
CTTCAGGAGT CTGAAGCGTC TGTGACTGAA ACTTCTTACG AACAAGAAGT TTCGTCTGAC
ACGGATGCAG ATGGCGAAGT TTGGCACGTT GAAATGTCAT CGATGGATGA CGACACGGAT
ACTGAGCATC CAGATCGTTC ACCGACCGTG GTTGACGAGA CAACGGTTTT GCCTGCTACA
GAACCAGTGT CGGAACCAGA GGAAGCCACG GCGCAGGAAC TGACACCTGA ACCCGCACCG
GTTATTGAAG ATCCGGTATT GCGTGAAATC TTCGATCAGG AATCCTCGGG TTATATCCAT
CAGTTGCGCC AACAGGTCGA TCACGCTTTG ATTAACTGGG TTTCTTTGCC CTGTGACAAG
GAATTGGTTC GACTGGTCCA TACGCTCTTG GGCTCTGCCA GAACCGCGGG TGTTCAGCCG
ATCGCGCGCA TATCCAACCG GCTTGAAGAA TGGATTCGCC TGCTTGAAGA GCACAACCAT
TCGCTGGAAC ACGAAGACCT GGCGGTATTC CAGCGTTCGT TGTTGATGAT GGACCGTTTA
CGTCAATGGG CGATTGAGCC GGCCTTCGAT CAACCGGACG AAGAACCGAT TGAAGTTGAA
ATTGCAGCGC GCATCGATCA GTTGTTGGTC GAGATTCTTT CCGCCGAACC CGAAACGGAA
GAATCAGTGG ATGAATACGC TGAATTTGCT TTGCCAGAAG TGGTTGATTC CGCAGAAGAA
GAAACGTCAG AAACTATTCA GGCGGTACCT GAGGCTTCAA CGCCCTTGTT CGAGCGAAGC
GCTGACATTG GTATGTCCGT TCGTCCCGAC GATATGCCGG GGGATCAAGA CCCGGATATT
CTGCAGATCT TCCTTGAGGA AGCGGAAGAG TTGCTGGAAA AGGCGGATGG TTACATCGCC
CACTGGCGTC AGCACCCGCA CGATCTCGAT TCCATTCGAT TGTTGCATCG CAACCTGCAC
ACCCTCAAGG GTGGCGCGCG TATGGCGGGC CTGCTGAATC TCGCCGATGT TACCCATTTG
CTGGAGGATC GACTGGATCG TGCCAGAGAT CGTGGGGGTG AGCAGGCCGA TGTCCTGATT
GCTCTGGTTC AGCACACCTA TGATGCATTG GGCAAGATGC TGGATCTGGT TCGCCGTCAG
GCGCCAATTC CCGCCCAAAT CAATTTGTTG GCCCAGATTG CGAACGAAGG TTCCGCTCAT
GCCATCGAAG CCCTTGTTTC GGATGATGAG GCATTGCGTG AACCCGTAAC CGCTCAGATC
GAAGAACCTT TCGCTGAAAG TGTATTCGAG CAGTCGGTCG AGGCACCTGC TGATGGGTCG
GCAGTTACCG GGTCGGTCGA AATGACCGAG TCCGCCGAGT CCACTGCGCC CCATGCCGCA
GCAGTCGCGA ACGAAGTGCG AAGAGAACAG ATTCGTGTTG ATGCAGACCG GATTGATGAC
CTGGTCAATC AGGTTGGCGA AAACGTGCTT TTGCAAGCGC GTGTGGATCG ACAGGTCAAT
GGTTTTGAAC GGCAGTTATT TGAGTTGCAG CAGACTTTGA CTCGCTTGCG CGGTCAGTTA
CGGCGCTTGG AAATTCAAAC CGAGTCGCAG ATGAAAGCCG AGTTGATGGC TGAAACGGGC
TTGAGTGCAG AGGAGTTCGA TCCACTCGAA TTCGACCGGT TTACGCAGGT TCAGGAATTG
AGCCGCGGCA TCATGGAAAG CTTGGGTGAT ATTTCGAGCA TCGAAGAAGC CATGAGCGAT
ATCACCGAGC AATCTCAGCT GCTCTTGCTG CAACAATCCC GTTTGGGGCG CAAACTGCAG
GATGGCATGC TGGCTCTGCG TATGGTCCGC TTCAACGACG TCGTTGGGCG TTTGCGCCGG
ATTGTCCGTC AGGTGGGCGA TGAAATGGGG CGCAATGCCG AACTGATCAT CCACAATGGC
GAGACCGAAC TTGACCGGGT CACGATCGTT GGCTTGTTGC CTTCGCTGGA GCACATGATC
CGCAACAGTC TGGCCCACGG TATCGAGTCG CCGGACGAAC GGCGTGTTCT GGGTAAACCG
GAAGTAGGGC AAATCGAAAT CACCATTGAA AGTGCGGGCG GTAACGTCAC GCTGGAGATG
AAAGACGATG GCCGCGGGCT TGATCTTGAT GCCATTCGTC GCAAGGCGGT TGAGCGCAAG
CTGATTCCTG CCGATATCGA TCTTTCCGAT GATGAAGCAC GCGCCCTGAT TTTCCTGCCG
GGTTTCTCGA CCGCAGGCAA CGTATCTCAG GTGGCCGGCC GCGGCGTTGG CATGGATGTG
GTCGCAGGTT CTGTCCGGGA GATGGGCGGT TTTGTGGACT TGCAGTCCGA GTTTGGCAAG
TTCACTCGAA TTCAGCTCAA CCTGCCGCTT ACTCAGGCCA TGACGCGCGG CATCCTGATT
TCGGTTGGCG ATAATCAATT TGCCATCCCG TACAAGGGCG TCGTGTCTGT AACGCGAATG
ACCTCTATTC AGCTGGCAGA GCAATATGCC AGTCCGAAGC CGGCTGTGAC GCTCAATGGC
GAGCAATATC CCCTGTTCTA TCTGGGCGAA TTGCTTCGTC ATGAACCGTT CAATGCCAAT
GCTCAGGAAG TGGGTGTACG TGCTGTCTTC CTGTTCAAGT TGGGTGAACG GCGTTTCGCC
GTGCAGGTCG ATCACCAACT GGGTGGTATT CAGCTATTTG TGAAGTCCTT GGGACCACAA
CTCGGTCGGA TTCCGGGCTT GTCCGGTGCC ACGATTTCCG ATGAGGGCAA TGTGATCCTG
GTGCTTGAGC TTTTCGAACT GGTTCGTCAG TTCCAGCGGC GCGATGATCG TCATCTTGAT
CTCACGGCTC AGGTGAGTGT GCGTCGTCGT CCTGTCGTGC TCGTGGTCGA TGATTCTCTG
ACTGTACGTA AGGTCACCGC GCGCACGTTG GAGCGGAATA ATCTGGATGT GATCCTTGCG
CGAGATGGCG TCGAGGCACT CGGCTTCCTG CATGAGCAAA AACCGGATGT GGTTCTGACC
GATATCGAAA TGCCGCGGAT GGATGGGTTC GAACTGTTGG GCGCCATCCG GAATGACGAG
CAGACGCGTA ATGTGCCCGT CATCATGATT TCATCGCGAA CCGGTCAGAA ACATCGTAGC
CGTGCGGAAG CGTTGGGCGT GAGTGCCTAT TTGGGCAAGC CTTATGCTGA AGCGGATCTG
ATCGGACGAA TCGAAAGTTT CATTACAGAC GTTCGTGATC GGACGAGGGG AAGTGGCTCT
GCCCTGGAAG AGGGGCGCAG TATCCAGAAC AATGAGGAGC AGGGATGA
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| Protein sequence | MRTESKVDSI VLDRLKEGLN EKIDQLLRAL EDLSSGAGGN ELVFESLDAV KAIDAVLAVS
DYQLLRVMLK EQMSALTQLE TNPEKAAVLV TTVTEAAWML RALLDRLSVG ATVNAMSLLP
MINRLRQSQG LSEVDTENVL ARSTVLWSES RVFVNPYVGQ IAAKSEEKTK SNQLLASMEQ
QILLLMRGDV TAIPGLIETF DRIIEREVNR AVVVATRSFE ELLGAVHQDQ ERYLPLAKRM
IGRVLRLFRM EIQGRDSLHI RFEAIEFATD MLLELVRVLP DDSELCGERV SNWHELLSTD
GERVRFLGLE TSALTQVAQV LSEELNAAQD VLDLFVRGAK SDLEPLVRIQ PRLEQIVGVL
AALNYEHESG LIQGALEQLI QVTRGSVLFD DDFLMQLAVA IMTTEQVVSQ IGHLIVDDSK
SLTSVDRVVS EALIPLATAC YEDVIASKEA VNMALRPTGQ PVAPDTLTNA ARLIAGVRNV
LEMAELRAAM PLINGLHRWL FLHVNNLQLV RSETISALAE VSAAVEFYLE NLRDHQKEMV
QFLDGALQML PVLNGGTEAH EGEQPRETLE PQNHNLDVQT SIDEEPQQPV DESLASMDEL
IAQLSMPNSD EFVEEAEVAT ALHGEETAVD AMPLETLDPP EDSDTAPIEA GELQAPELVL
DENFVLDVSE ETHSGEDADV LSQSAREPET AFLAPDTIEA IPAEEPSTEP MVESVEDNAH
LGNFDLIEHQ HEAASGEEPA GEASQVKADA EFDLPAAWAA ELSLDLEQDE PVFEQKSAET
PVAEDEPLPD FETLDLSLPP SEKEPVESTT EWSFLQNASD SDIDLTLPPS DPQSPEHPSF
LEEPFNSDLS LDALSLPDIE QAPGRAPESE TGMVSDAEVG ESSAPSATPE FEETLDELAI
EMREVFAEEM QEELPALLEA ARTWSNQGGR DHLVTLRRGF HTIKGSSRMV GLTAIGDWGW
SYEHLLNQVL DDRVTSTPAL RADVLSAVSL MNEALPVLSQ GQCPPVSYWQ ESLGWAEAWS
NDQSKDGAAS ESAITESAPE AETLVAEADV PTVESHEWVQ DAPSEVDENI LEKFAPSEEI
LQESEASVTE TSYEQEVSSD TDADGEVWHV EMSSMDDDTD TEHPDRSPTV VDETTVLPAT
EPVSEPEEAT AQELTPEPAP VIEDPVLREI FDQESSGYIH QLRQQVDHAL INWVSLPCDK
ELVRLVHTLL GSARTAGVQP IARISNRLEE WIRLLEEHNH SLEHEDLAVF QRSLLMMDRL
RQWAIEPAFD QPDEEPIEVE IAARIDQLLV EILSAEPETE ESVDEYAEFA LPEVVDSAEE
ETSETIQAVP EASTPLFERS ADIGMSVRPD DMPGDQDPDI LQIFLEEAEE LLEKADGYIA
HWRQHPHDLD SIRLLHRNLH TLKGGARMAG LLNLADVTHL LEDRLDRARD RGGEQADVLI
ALVQHTYDAL GKMLDLVRRQ APIPAQINLL AQIANEGSAH AIEALVSDDE ALREPVTAQI
EEPFAESVFE QSVEAPADGS AVTGSVEMTE SAESTAPHAA AVANEVRREQ IRVDADRIDD
LVNQVGENVL LQARVDRQVN GFERQLFELQ QTLTRLRGQL RRLEIQTESQ MKAELMAETG
LSAEEFDPLE FDRFTQVQEL SRGIMESLGD ISSIEEAMSD ITEQSQLLLL QQSRLGRKLQ
DGMLALRMVR FNDVVGRLRR IVRQVGDEMG RNAELIIHNG ETELDRVTIV GLLPSLEHMI
RNSLAHGIES PDERRVLGKP EVGQIEITIE SAGGNVTLEM KDDGRGLDLD AIRRKAVERK
LIPADIDLSD DEARALIFLP GFSTAGNVSQ VAGRGVGMDV VAGSVREMGG FVDLQSEFGK
FTRIQLNLPL TQAMTRGILI SVGDNQFAIP YKGVVSVTRM TSIQLAEQYA SPKPAVTLNG
EQYPLFYLGE LLRHEPFNAN AQEVGVRAVF LFKLGERRFA VQVDHQLGGI QLFVKSLGPQ
LGRIPGLSGA TISDEGNVIL VLELFELVRQ FQRRDDRHLD LTAQVSVRRR PVVLVVDDSL
TVRKVTARTL ERNNLDVILA RDGVEALGFL HEQKPDVVLT DIEMPRMDGF ELLGAIRNDE
QTRNVPVIMI SSRTGQKHRS RAEALGVSAY LGKPYAEADL IGRIESFITD VRDRTRGSGS
ALEEGRSIQN NEEQG
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