Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0466 |
Symbol | |
ID | 8533590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 492545 |
End bp | 493210 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 646382846 |
Product | protein of unknown function UPF0005 |
Protein accession | YP_003262369 |
Protein GI | 261855086 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCTGC AAAATTCAAC CGTAAGTCCG CGTCGAGAAT CCTTGCTGGC GACCAACCAG CTGATTCGCA ACACCTACCT GATGTTATCG ATGACCTTGG TGTTCAGTGC CGTCATGGCC GGCGTATCCA TGTGGATGAA CCTGCCGCCG ATGATTTCGC TCATTGCGAT GTTCGGTTCG ATGGCATTGA TCTGGTTTGT CCTGCCCCGC ACGGCACGCT CCGGCGCGGG TCTGGTGACC GTATTCGCCA TCACCGGCCT GATGGGGTTG GGCCTGGGGC CAACCATCAA TTATTACCTG CACCTTGAAG GCGGTGACCA GATCGTTATG ACGGCTTTGG GCGGCACCGG TGCGATTTTT CTGGCGCTGT CTGCGTATGC GCTTATCTCT CGCCGTGATT TTTCGTTCAT GGGTGGCTTT TTGATGGTCG GCATGATCGT GGTGCTGCTA GCCATGCTCG GGAACTTGTT TTTCCATTTG CCGGCATTGT CCATGGCGCT TTCCGGCGCG GTCATCCTGT TGATGAGTGG ATTTATCTTG TTCGACACCA GTCGCATGGT GAACTCCGGT GAGGACAACT ACCTGATGAT GACGGTGAGT TTGTATCTCA GCATCTTCAA CATCTTCGTC AGTTTGCTGA ATATTCTGGG TGCTAGCCGG GACTGA
|
Protein sequence | MSLQNSTVSP RRESLLATNQ LIRNTYLMLS MTLVFSAVMA GVSMWMNLPP MISLIAMFGS MALIWFVLPR TARSGAGLVT VFAITGLMGL GLGPTINYYL HLEGGDQIVM TALGGTGAIF LALSAYALIS RRDFSFMGGF LMVGMIVVLL AMLGNLFFHL PALSMALSGA VILLMSGFIL FDTSRMVNSG EDNYLMMTVS LYLSIFNIFV SLLNILGASR D
|
| |