| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0448 |
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| Symbol | |
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| ID | 8533571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 471863 |
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| End bp | 473278 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646382828 |
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| Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
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| Protein accession | YP_003262352 |
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| Protein GI | 261855069 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.483949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAC ACAGCCTCAT TCTGGGTATG GGTAAAAGCG GGCTATCCGT GGCGCGGCAT
TTGTCGCGTC TCGGCCTGCC GTTTGCTGCT GCCGATACTC GCGATGACGC TGTATTGCGT
GCCGAGTGGG TTGCGCAGTA TCCAGACATT TCCATCACCA TGGGCGCCTT GCACGAGTCG
CTGCTGGATA ACGTGGCGGA GCTCATCGTC AGCCCCGGTA TCGCGCTGGA TTTGCCCTTG
ATCATGTCGG CACGAGTGAA GCAAATTCCC GTGCGAGGCG ATATCGATCT GGCTCTGCAT
GCGAGCGATG TGCCCGTCGT TTTGATTACC GGCTCGAACG GCAAGAGCAC GGTGACGGCG
CTCGTTGGCG AATTGCTGAA TGCGGCAGGC GTGTCTGCCG TAGTGGGCGG AAATTTCGGT
ACCCCCGCAC TGGATTTGCT GACTACCGAT GCCGATGTGC TGGTGCTTGA AGTGTCCAGC
TTTCAGCTCG AATCGACCGA TTTCAGCGGC TTGGCGCCCG CACAGATGCC GCGAGCCGCA
ACGGTGCTGA ATATCAGTCA GGATCACCTC GATCGCCACG GTACGCTGGC GCACTACGCT
GCGATCAAGG AAACCGCGTT GCATCAGGCG CGTCGCGCGG TGTTGAACCG GGACGATCCT
ATGGTGGCCG CGATGGCGGA ACGGGCCTCG GGCGATGTGA TCTGGTTCGG TACGGCCATG
CCAACGCAAC CGAGTGATTT TGGCCTGATG ACGATCGCAG GTGAATCATG GCTGATACAG
GCTCAGGCAA ATGCAACCGC ACTTTCGATT CTACCTGTTC AAGCATTGGG TTTGACCGGG
CGGCACAATC AGATGAATGT GTTGGCGGCT CTGGCGTTAA TACAAGCCGT TGTGCCGGAT
GTTGCTTTGA ACGACGATCG CTTGCTGAAC GTCCTGCGTC AATTCACCGG TTTGCCGCAC
CGGGCTCAAA GCGTGGGCGT GATCAATGGT GTGCGCTTCA TTGACGATTC CAAGGCCACC
AATGTGGGCG CGGCTGTTGC GGCCATTCTC GGAATGCCTG CACCATTGGT TTTGATTGCC
GGCGGTCAGG GTAAAGGACA GGACTTCGCC CCCTTGGCCG AATCGCTGGT CGGGCGTTGT
GCCGGCTTGA TTCTTATGGG ACAGGATCAG GCGGTTATCG CCGAAGCGCT GCAGAATGAA
CCGGGTGCTA CATGGCCCGT TCGTCGCGTG CATTCGATGA TCGAAGCGGT TCAGGCGGCA
GCAGATATCG CGCCACCACA ATCTACGGTG TTGTTGGCAC CCGCTTGCGC CAGTCTCGAC
ATGTTCGTGA GCTATGTGGA TCGCGGCAAT CAATTCGCCG CCGCGGTAGC GTCACTTTCC
GCCAAAAAGA CAAATGGTAC GGAGTTCACC TCATGA
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| Protein sequence | MEKHSLILGM GKSGLSVARH LSRLGLPFAA ADTRDDAVLR AEWVAQYPDI SITMGALHES
LLDNVAELIV SPGIALDLPL IMSARVKQIP VRGDIDLALH ASDVPVVLIT GSNGKSTVTA
LVGELLNAAG VSAVVGGNFG TPALDLLTTD ADVLVLEVSS FQLESTDFSG LAPAQMPRAA
TVLNISQDHL DRHGTLAHYA AIKETALHQA RRAVLNRDDP MVAAMAERAS GDVIWFGTAM
PTQPSDFGLM TIAGESWLIQ AQANATALSI LPVQALGLTG RHNQMNVLAA LALIQAVVPD
VALNDDRLLN VLRQFTGLPH RAQSVGVING VRFIDDSKAT NVGAAVAAIL GMPAPLVLIA
GGQGKGQDFA PLAESLVGRC AGLILMGQDQ AVIAEALQNE PGATWPVRRV HSMIEAVQAA
ADIAPPQSTV LLAPACASLD MFVSYVDRGN QFAAAVASLS AKKTNGTEFT S
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