Gene Hneap_0383 details

Gene Information

• Locus tag: Hneap_0383
• ID: 8533504
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: +
• Start bp: 395075
• End bp: 396916
• Gene Length: 1842 bp
• Protein Length: 613 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 646382761
• Product: GTP-binding protein TypA
• Protein accession: YP_003262287
• Protein GI: 261855004
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGCTC CTGTGATTTC TCATTTGCGT AACATCGCCA TTATTGCCCA CGTTGACCAT 
GGTAAAACAA CCCTGGTTGA TAAGCTCCTG CAACAATCCG GTACCCTGGA CGCCCGTACC 
GATACCGGTG AGCGGATGAT GGACTCCAAC GCGATCGAGA AAGAGCGCGG CATCACCATT 
CTGGCGAAAA ACACCGCCAT CCGCTGGACC AGCCCGAGCG GTGAAGAATA CCGCATCAAT 
ATCGTCGATA CGCCTGGCCA CGCCGACTTC GGTGGCGAAG TGGAACGCGT GCTGTCGATG 
GTTGATTCCG TGCTGCTGCT GGTGGACGCC GTTGATGGCC CGATGCCACA AACCCGTTTC 
GTCACGCAAA AAGCTTTCGA GCACGGCTTA AAGCCGATTG TTGTCATCAA CAAGATTGAC 
CGCCCCGGCA GCCGTCCGCA GTGGGTGGTA GATCAGGTGT TCGATTTGTT CGACCGCTTG 
GGTGCCTCCG ACGAGCAGCT CGATTTCCCG ATTGTCTATG CCTCAGCGCT CAACGGGTAC 
GCAGGATTGG AAGACTCGGT GCGCGAGGGT GATATGACCC CGTTGTATCA GACCATTGTC 
GATTCGGTAG CACCGCCGGA CGTGGATGCG GAAGGCCCGT TGCAAATGCA GGTATCCAGC 
CTGGACTACA ACCCGTATAT GGGTGTCATG GGGATTGCCA AGATTCAGCG GGGACGGATT 
AAAACCAATA CACAGGTCAA GGTCGTTGAT CGCGAGGGTG CTATCCGTTC GGGCCGAATC 
CTCCAGATCA TGGGCTTCCA TGGTCTGGAG CGGATTGAAG TGCCGAGCGC GCAGGCGGGC 
GACATTATTG TGTTTTCCGG TCTCGACCCG CTGTTTATTT CTGACACCAT CTGCGATCCG 
GAACACGTCG AAATGCTCCC GCCGCTGACA GTCGACGAGC CGACCGTGAG CATGTCCTTC 
AACGTTAATA CCTCGCCATT CGCGGGCAAA GAAGGCAAGT TCATCACCAG TCGTCAAATT 
CGTGACCGGT TGCACAAAGA ACTGCTGCAC AACGTCGCCC TGCGCGTTGA GGATACCGAG 
GAAGGTGACA AATTCCGTGT GTCCGGCCGA GGTGAATTGC ACCTTTCAGT ATTGATCGAA 
AACATGCGCC GCGAAGGGTT TGAGATGGGC GTTGGTCGCC CTGAAGTCAT CATTCGCGAA 
GTCGATGGCG TCAAGCAGGA GCCCTACGAG CAGCTCGTCG TGGATATCGA AGAGCAGAAT 
CAGGGCGCGG TCATGGAAAA ACTGGGCACC CGCCGTGCGG AATTGCGGAA CATGGAACCC 
GATGGCAAAG GCCGTGTGCG TCTGGAATAC ATCATTCCTT CGCGTGGACT GATTGGTTTT 
AGAACCGAAT TCATGACGGC CACGCAAGGC ACCGGTCTGT TGTTCTCCGT GTTTGATCAT 
TACGGTGAAT ACAAGCCGGG CAACGTGGGT CAACGCATCA ACGGTGTGTT GATTGCCAAT 
GAAACCGGCA AGGCGCTGTC TTATGCGCTC TACAACCTGC AGGATCGGGG CAAGATGATG 
ATCGGTCACG GGGATGAAGT GTACGAAGGT CAGGTCGTGG GTATTCATTC ACGCGATAAC 
GATCTGACGG TCAACGTCCT CAAGGGTAAG AAGCTCACCA ATATGCGTGC TTCCGGCACG 
GATGAGGCCC TCACGCTCGT GCCGCCGATC CGATTCACGC TGGAGCAGGC ACTGGAATTC 
ATCGACGACG ACGAGTTGGT CGAAGTGACC CCGGCCTCGA TTCGTATTCG CAAGAAATGG 
CTGACCGAGC TGGATCGCAA GCGTTATGGC CGTGGCGACT AA 

 

Protein sequence

MDAPVISHLR NIAIIAHVDH GKTTLVDKLL QQSGTLDART DTGERMMDSN AIEKERGITI 
LAKNTAIRWT SPSGEEYRIN IVDTPGHADF GGEVERVLSM VDSVLLLVDA VDGPMPQTRF 
VTQKAFEHGL KPIVVINKID RPGSRPQWVV DQVFDLFDRL GASDEQLDFP IVYASALNGY 
AGLEDSVREG DMTPLYQTIV DSVAPPDVDA EGPLQMQVSS LDYNPYMGVM GIAKIQRGRI 
KTNTQVKVVD REGAIRSGRI LQIMGFHGLE RIEVPSAQAG DIIVFSGLDP LFISDTICDP 
EHVEMLPPLT VDEPTVSMSF NVNTSPFAGK EGKFITSRQI RDRLHKELLH NVALRVEDTE 
EGDKFRVSGR GELHLSVLIE NMRREGFEMG VGRPEVIIRE VDGVKQEPYE QLVVDIEEQN 
QGAVMEKLGT RRAELRNMEP DGKGRVRLEY IIPSRGLIGF RTEFMTATQG TGLLFSVFDH 
YGEYKPGNVG QRINGVLIAN ETGKALSYAL YNLQDRGKMM IGHGDEVYEG QVVGIHSRDN 
DLTVNVLKGK KLTNMRASGT DEALTLVPPI RFTLEQALEF IDDDELVEVT PASIRIRKKW 
LTELDRKRYG RGD