| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0380 |
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| Symbol | |
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| ID | 8533501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 393520 |
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| End bp | 394365 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646382759 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_003262285 |
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| Protein GI | 261855002 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATCC ACTTCACCAA AATGCACGGA CTGGGCAACG ATTTCATGGT CATCGACGCC
ATCAATCAAG CCATCGAGCT CAATCCAGAA CAGATCAGGC AGTGGGCCAA TCGGCATTTC
GGCATCGGTT TCGATCAACT GTTGATCGTC GAGCCGCCCA AAACCGCCGA CACATTGTTC
ACCTATCGCA TATTCAATGC GGATGGCGGC GAGGTCGAGC AATGCGGCAA TGGTGCGCGC
TGCTTTGCCC GATATGTTTA TGACAAAGGA TTGACCACCG AGAAAGAAAT CCCCGTTGGC
ACCGCCAGTG GCCGGATTGT GCTGCATATC AATGATTCAG GCGATGTCAC CGTCGACATG
GGGCGACCGA TGTTCACTCC AACCAACATC CCCTTTATCA CCGAATGCGA AGCCACAAGC
TATCCATTAA CACTTGATGA CGGCAGTGAA TGGGTCATTG ACGCAGTTTC CATGGGCAAT
CCACACGCCG TGCTCGAGGT GGAAAACGTC GACACTGCCC CGGTCAGTCA TCTCGGCCCG
ATGATCGAAC ACCATCGACA GTTTCCCAAC CGGGTAAATG TGGGGTTTAT GCAAATCGTC
GATCGCCAAC ACATCCGGCT GCGTGTATTT GAGCGCGGCA GCGGCGAAAC ACTCGCCTGC
GGAACCGGCG CCTGCGCAGC GGTTGTCAGC GGCATTCGTC GAAACCGGCT TGATTCTCCC
TGCCTTGTCG ACGTTCGCGG CGGAAGACTC TCTGTGGCAT GGACGGGCAA AACCCAAGAC
TCGGTATTGA TGACCGGCCC GGCTCAAAGC GTTTTTGAAG GCCAAATTAC CCAAACCATC
GCATGA
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| Protein sequence | MTIHFTKMHG LGNDFMVIDA INQAIELNPE QIRQWANRHF GIGFDQLLIV EPPKTADTLF
TYRIFNADGG EVEQCGNGAR CFARYVYDKG LTTEKEIPVG TASGRIVLHI NDSGDVTVDM
GRPMFTPTNI PFITECEATS YPLTLDDGSE WVIDAVSMGN PHAVLEVENV DTAPVSHLGP
MIEHHRQFPN RVNVGFMQIV DRQHIRLRVF ERGSGETLAC GTGACAAVVS GIRRNRLDSP
CLVDVRGGRL SVAWTGKTQD SVLMTGPAQS VFEGQITQTI A
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