| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0371 |
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| Symbol | |
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| ID | 8533492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 386116 |
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| End bp | 387873 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646382753 |
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| Product | Polypeptide-transport-associated domain protein ShlB-type |
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| Protein accession | YP_003262279 |
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| Protein GI | 261854996 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCAGC CAACGGATGG CTTGTCTCTG CATCAACAGA GTCGGCAACC TTTTGATGTT
TTTATGCGCA GGGTATTTCT TTGCGCGCTG TTTTCGCTGC TTTGGGGTGC TTCTGGAGCT
TGGGCTCAAC CACCTGTTGC TTCCTCATCG GTGCAACAGG AGTTGCTTCA GCAGCAGCGC
CAACGTGCTC TGGAGCAAGG TCAGCAAGCA ACACCAGATG TTCGCTTGCA AAAAGGACTC
GCTAAACTGC CGAGCACTCT GCCGAAACAT GAAACGCCGT GCGTCTTCAT CAACCAAGTC
ACGCTTGGTG GCGAAGGTGC CGGTCAATTT TCATGGGCAA TAAAGACGGC CAGTCGGGCT
CTTGGTGGCA TCAAAGGACG CTGCATTGGT ACCAACGGCA TTCAGATTCT GGTCAAACAG
GTTCAGAACG CCATTCTCGC TCGTGGATTC ATCACCACGC GGGTACTGGT AACCCAGCAA
AATCTAAACG ACCATAAACT GACTTTGACT ATCATCCCCG GCCGAATTGG TGCCATACGG
TTGGCCAAAG GCAGCAATCC GCGCGGTACC CTCTGGAATG CCTTTCCTGC AAAGCCCGGC
GATCTACTTA ATCTGCGCGA TCTCGAGCAG GGGCTTGAAA ACCTCCAGCG CCTTCCTACG
GCCTCCACGC ATATCAATAT CAAGCCCGGC GAACAGCCCG GCACCAGTGA CATTGTGACG
GATTGGCAAC AGCGCTTTCC GTTTCGTCTG AGCATGTGGG TCGATGATGC GGGCAGTGAA
GCGACGGGGC ACTACGAAGG CACGGTGGTG CTCTCCTACG ACGATTGGTT CACCTTAAAC
GATCTGTTTT ATGCGAGCTT TACGCGCGAC CTCGGGCTAG ATAATGGCCG TAATAAAAGG
GGCACCCAGT CCTACACCTT TCATTATTCT GTGCCGTATG GCTATTGGTT GCTCGGCTTT
ACGACCAACC GGTTCCGGTA CTACCAAACG GTTGCTGGCA TCAATCAGGA TTACCGGTAC
AGCGGCACCG GAACGCGACA GGATCTGAAA TTGTCGCGGA TCATTCACCG CAATGCGCAT
GGTAAAACAC GCGTTAGTCT GGACGCCTAC CTACAGACTT ATGGCAATGC CATCGATGAT
ACGACCATCG AAGTGCAGCA ACGCAGAATG GCTGGTTACA TTTTCGACAT ACATCAGCGC
CAGTTCATTG GCCGGGCGAC TCTGGATATG GATGTCGGGT ACCGCTGGGG TACCGGCGCA
CTGGGTGCCG AACCCGCACC GGAGGAAGCC TATGGTGGAG GCACATCACG TCCACATATT
GCTTCGGCAT CAATCCAGTT CAATACGCCT TTTTCTGCCC TCGGACAATC CTGGCGGTAC
CAGGGCGAAT TACGCGGACA ATACAACTAC ACGCCACTGA TTCCTCAAGA CCGCTTTGCC
ATTGGTGGTC GTTATACCGT CCGCGGCTTT AGTGGCGAGC AAGTCCTCTC AAGTGAGCGT
GGGCTCATCT TCCGTAACGA TTTGGGCATT GTGATCGCAG GCAACAACGA ACTTTACCTC
GGTCTTGATT ATGGTCAGGT TGGTGGTTCA TCGGCGCAAC AGTTGCTGGG TACCCGACTG
GCCGGTGGCG TCATCGGAAT CCGAGGCGCC TATAAATTAC TCAACTACGA CGTTTTTGCT
GGCCACGCTA TCGCCAAACC TGATGGTTTC CCGGCCAAAG GCATCACCGC TGGATTTAAC
ATCGGTTGGA CGATCTGA
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| Protein sequence | MFQPTDGLSL HQQSRQPFDV FMRRVFLCAL FSLLWGASGA WAQPPVASSS VQQELLQQQR
QRALEQGQQA TPDVRLQKGL AKLPSTLPKH ETPCVFINQV TLGGEGAGQF SWAIKTASRA
LGGIKGRCIG TNGIQILVKQ VQNAILARGF ITTRVLVTQQ NLNDHKLTLT IIPGRIGAIR
LAKGSNPRGT LWNAFPAKPG DLLNLRDLEQ GLENLQRLPT ASTHINIKPG EQPGTSDIVT
DWQQRFPFRL SMWVDDAGSE ATGHYEGTVV LSYDDWFTLN DLFYASFTRD LGLDNGRNKR
GTQSYTFHYS VPYGYWLLGF TTNRFRYYQT VAGINQDYRY SGTGTRQDLK LSRIIHRNAH
GKTRVSLDAY LQTYGNAIDD TTIEVQQRRM AGYIFDIHQR QFIGRATLDM DVGYRWGTGA
LGAEPAPEEA YGGGTSRPHI ASASIQFNTP FSALGQSWRY QGELRGQYNY TPLIPQDRFA
IGGRYTVRGF SGEQVLSSER GLIFRNDLGI VIAGNNELYL GLDYGQVGGS SAQQLLGTRL
AGGVIGIRGA YKLLNYDVFA GHAIAKPDGF PAKGITAGFN IGWTI
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