Gene Hneap_0294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0294 
Symbol 
ID8533409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp304266 
End bp304814 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content53% 
IMG OID646382672 
Productfatty acid hydroxylase 
Protein accessionYP_003262204 
Protein GI261854921 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00278086 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTGT TGAGTTTTAA ATTGGGCAAA GTGGCTTATA CCGTTGATCT GGCCGTCTAT 
CTCGTAGCAC CCTTCCTTGC GGTTGCTTCA CTGTTCTACT TCAGCGAGAA AAGAGAGGCA
ATTCCTATTC TGGCGGCGGC ACTGCTGGGT TTTGTCGGCT GGACGTTGCT GGAATACATC
CTGCACCGTT TCGTATTGCA CCACCTCTCG CCCTTTAAAG AATGGCACGG CGAGCACCAC
CACAACCCGA CCGAGGCCAT GGGCACACCC ACGCTGCTCA GCCTGCTGTT GATCGTTGGA
ATCATTTTTT TGCCCTCCGT TTATCTGGCA GGTTGGCAAA TCGGCGGCGG CTTTGCGATG
GGCCTGTTGC TCGGATACAG CATTTACACC TGGTTGCATC ACGGCGAGCA CCATTGGCGC
GGTCACAACA AGTGGTTCAG AAATCTCAAA CGCGCCCATG CGATCCATCA CTACGGCCAC
AATGAACACA ACTTCGGTGT GGTCACATCG TTCTGGGACC GCGTCTTCGG GACCTATACC
CGGAAATAA
 
Protein sequence
MSLLSFKLGK VAYTVDLAVY LVAPFLAVAS LFYFSEKREA IPILAAALLG FVGWTLLEYI 
LHRFVLHHLS PFKEWHGEHH HNPTEAMGTP TLLSLLLIVG IIFLPSVYLA GWQIGGGFAM
GLLLGYSIYT WLHHGEHHWR GHNKWFRNLK RAHAIHHYGH NEHNFGVVTS FWDRVFGTYT
RK