| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0278 |
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| Symbol | |
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| ID | 8533393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 284451 |
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| End bp | 287723 |
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| Gene Length | 3273 bp |
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| Protein Length | 1090 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 646382656 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_003262188 |
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| Protein GI | 261854905 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAAG CCGTGATTGA CGCCTCGATC AATAATCGAG TGCTGGTGCT CCTGCTGGCC
GCCATTCTGG CGGTGGTCGG CTGGTATTCG TGGAAAGCCA CGCCGCTGGA TGCGATTCCC
GACCTGTCCG ATACCCAGGT CATCATTAAA ACCACCTATC CCGGCCAGTC GCCCCAGGTG
GTGCAGGATC AGGTGACCTA TCCGTTGACG ACGGCATTGC TCGCCGTGCC CGGCTCGACG
GCGGTGCGGG GTTATTCGTT CTATGGCGAT TCGTATATTT ACGTCACGTT CAAGGATGGC
ACGAACCTGT ATTGGGCGCG TTCAAGGGTA CTTGAGTATC TCAATCAGGC ACGTTCCAGC
CTGCCTGCTG GCGTGGAACC ACAACTTGGC CCGGATGCGA CGGGCGTAGG TTGGGTGTAT
GAGTACGCGC TCACCGACCC TTCGGGCCAG ATGAATCTGT CGCAACTGAC GACCTTGCAG
AACTGGTTCT TGAAATTCCA GTTGCAGACT GTGTCTGGAG TTTCGGAAGT TGCGACGGTG
GGCGGCATGG TGCGCGAGTA CCAGATCGTG GTGGATCCCG ATCGTCTACG TGCGTTCGGC
GTATCGCTCG CCACGCTGCG CAAGGCCGTG GCCGATGCCA ACAAGGAAGT CGGCGGCGGG
GTGCTGGAGC TCGGTGGCGC AGAATACATG GTCACCAGCC GGGGCTATCT CAAAAGCGTG
GCCGATATCG AGCGCATTCC GGTGGGCGTG ACTCAAAGCG GCACGCCGAT TCTGGTGCGG
GATCTCGGTA CGGTTCGCCT GGGACCTGCG CCGCGTCGAG GGGTAGCTGA TCTCGATGGC
AAAGGCGAGG TGGTCGGCGG CATCATTGTG ATGCGCTCCG GTGAGAACGC GCGTCAGGTC
ATCGATGCGG TGAAGACCAA AATCGAACAC CTAAAACCAA GCTTGCCCAA AGGCGTGGAA
ATCGTGCCGG TATATGACCG CTCCGGCGTC ATCAACCGGG CGGTGGATAC CCTGAGCAGC
AAACTGGTCG AGGAATTCCT CGTGGTGGCG CTGGTGTGTG CGATTTTCCT ATGGCATCTG
CGTTCGGCGC TCGTGGCGAT CATCGGCCTA CCCTTGGGCG TGTTGATGGC CTTCATCGTG
ATGCACGCGC AGGGCATCAA CGCCAACATC ATGTCGCTCG GTGGCATTGC GATTGCCATC
GGCGCGATGG TCGATGCCGC CATCGTGATG ATCGAAAATG CCCACCGGCA TCTGGTGGCG
TGGCGCGAGA CGCACGGCAG CCCGCCCAAA GGTGACGATC ATTGGCGCTT GATCGCCCAA
TCAGCGGGAG AGGTCGGGCC GGCGCTGTTT TTCTCGCTGC TCATCATCAC CCTGTCGTTC
ATTCCTGTAT TTACCCTGCA AGCACAGGAA GGGCGCATGT TCGCCCCACT GGCTTTCACC
AAAACCTATG CGATGGCGGC GGCGGCGGGT CTGGCAATCA CCTTGATCCC GGTGTTGATG
GGCTACTTCA TTCGTGGACG CATTCCACGA GAGGAAGCCA ATCCGCTCAA TCGCTTCTTG
ATTGCGCTCT ACCGTCCGGT GTTGCATACG GTGCTGCGTT TCCCCAAAAC CCTGATGGCG
ATCAGTCTGA TCTTCGTGCT ATCCGCGGTA TTGCCTTTGG CCGGGGTTGG CGGGTATCTG
GCCCCGCTCA AATGGGTGGG CAGCAGCGCG TGGCAGTTGC ACGTCAGCGA CTGGCAAAAC
GATTGGGCCA AGCGTTGGGC AAGCACGTTC TCGTTCGCGC CCAAAATAGC GGAACTGGGC
CGGGGCTTGG GTAGTGAGTT CATGCCGACA CTGGATGAAG GCGACTTGCT TTATATGCCC
ACCACCGCGC CGGGGTTATC CATTGGCGAT GCGCGCTTGC TGTTGCAGCA GGTCGACGCG
CTGATTGCCG AAGAACCGGT AGTTAAATCA GTGTTCGGCA AAATCGGCCG GGCAGACACG
GCCACCGATC CCGCGCCGCT GACCATGATC GAGACCACGA TTCAGTTCAA GCCCAAAAGC
GAATGGCCTG CGGGCATGAC GCTGCAAAAA GTGATCGACA ACCTCAATCA GAAGATTCAG
TTCCCGGGGC TGAACAATGC CTGGGTCATG CCGATCAAGA CCCGAATCGA CATGCAGACC
ACCGGCATTC AAACCCCGGT TGGCGTCAAG ATCACCGGGC CCGATCTTCA TCAGATCGAC
CGCATCGGCA AACAGGTCGA GGCGGTGTTG CAGACCGTGC CCGGCACGCA GACGGCCTAC
GCCGACCGTA CCAACGGCGG GCGTTATATC GAAATCACAC CGGATCGCAT CAAGGCCGCG
CGTTTCGGTT TGAACATCGG TGAAATTCAG GATGTCATCA GCTCGGCGGT CGGCGGGGTG
GAAGTGACGC AAACCGTCGA AGGGCTGGAG CGTTTTCCTG TGAGTATTCG TTATCCGCGC
GCCGATCGGG ATAGCGTGAG CAAGCTCAAG GACTTGCCGA TTGTGACACC GACCGGCGCC
ACGGTGGCGT TGGGGCAGAT TGCCACGGTT CAGGTCACCG ATGGTCCGCC CATGATCCGC
TCCGAGGACA GCCGCCCCGC TGGTTTCGTG TTCGTCACCA CCCAAGGGGT CGATCTGGGT
AGTTATGTCA ACAATGCGCG TCGGATCGTC GATGCCAAGG TGAAGTTGCC GCCGGGCTAT
GCCATCAGCT GGACGGGTCA ATATCAGTAC CTGCAACGGG CCACGGAGCG CCTCAAGCAG
GTGGTGCCCC TGACTCTTGC GATCATTTTC GTGCTGTTAT TCCTGATCTT CCGGCATGGC
GGCAAGGCCA GCCTGATTAT GGTGACGCTC CCGTTCGCAC TGGTCGGCGG CTTCTGGCTG
TTGTGGGCCT TGGGGTTCGA GTTGTCGATT GCGGTCGCGG TCGGCTTCAT CGCGCTGGCC
GGCGTGGCCG CTGAATTTGG CGTGGTGATG TTGATCTATC TCGATCACGC CATCGAGGAT
CGGCGCCGCG CCGGGCGGCT GAACACCCGA ACCGATCTGC GAGATGCCAT CATGGAAGGC
GCGGTGCTGC GCGTTCGCCC TAAAGCGATG ACCGTGGCGG TGATTCTGGC AGGCCTGATC
CCGATTCTGG TCGGACACGG TACCGGTTCG GAAGTCATGA GCCGCATCGC CGCCCCCATG
ATCGGCGGCA TGATCACCGC CCCGTTACTC TCCATGCTGC TGTTGCCCGC CGTGTACTGG
CTCTGGCAGC GACGGCATTT GCCAGCAGGA TAA
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| Protein sequence | MLKAVIDASI NNRVLVLLLA AILAVVGWYS WKATPLDAIP DLSDTQVIIK TTYPGQSPQV
VQDQVTYPLT TALLAVPGST AVRGYSFYGD SYIYVTFKDG TNLYWARSRV LEYLNQARSS
LPAGVEPQLG PDATGVGWVY EYALTDPSGQ MNLSQLTTLQ NWFLKFQLQT VSGVSEVATV
GGMVREYQIV VDPDRLRAFG VSLATLRKAV ADANKEVGGG VLELGGAEYM VTSRGYLKSV
ADIERIPVGV TQSGTPILVR DLGTVRLGPA PRRGVADLDG KGEVVGGIIV MRSGENARQV
IDAVKTKIEH LKPSLPKGVE IVPVYDRSGV INRAVDTLSS KLVEEFLVVA LVCAIFLWHL
RSALVAIIGL PLGVLMAFIV MHAQGINANI MSLGGIAIAI GAMVDAAIVM IENAHRHLVA
WRETHGSPPK GDDHWRLIAQ SAGEVGPALF FSLLIITLSF IPVFTLQAQE GRMFAPLAFT
KTYAMAAAAG LAITLIPVLM GYFIRGRIPR EEANPLNRFL IALYRPVLHT VLRFPKTLMA
ISLIFVLSAV LPLAGVGGYL APLKWVGSSA WQLHVSDWQN DWAKRWASTF SFAPKIAELG
RGLGSEFMPT LDEGDLLYMP TTAPGLSIGD ARLLLQQVDA LIAEEPVVKS VFGKIGRADT
ATDPAPLTMI ETTIQFKPKS EWPAGMTLQK VIDNLNQKIQ FPGLNNAWVM PIKTRIDMQT
TGIQTPVGVK ITGPDLHQID RIGKQVEAVL QTVPGTQTAY ADRTNGGRYI EITPDRIKAA
RFGLNIGEIQ DVISSAVGGV EVTQTVEGLE RFPVSIRYPR ADRDSVSKLK DLPIVTPTGA
TVALGQIATV QVTDGPPMIR SEDSRPAGFV FVTTQGVDLG SYVNNARRIV DAKVKLPPGY
AISWTGQYQY LQRATERLKQ VVPLTLAIIF VLLFLIFRHG GKASLIMVTL PFALVGGFWL
LWALGFELSI AVAVGFIALA GVAAEFGVVM LIYLDHAIED RRRAGRLNTR TDLRDAIMEG
AVLRVRPKAM TVAVILAGLI PILVGHGTGS EVMSRIAAPM IGGMITAPLL SMLLLPAVYW
LWQRRHLPAG
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