| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0251 |
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| Symbol | |
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| ID | 8533366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 256158 |
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| End bp | 257315 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646382629 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_003262161 |
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| Protein GI | 261854878 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCGAC TCCCAAGTTA CGTTACCATC CTCCTGATTG TTCTTGTGAT CCCGCCCATA
CTGGGTTCGG GCGCATGGGC GACCGAATTT ATTCTGAACC GTCCAGCACC TACGGCAGCC
AGCCATCCGC TGCCCCTCGA CGAATCACAG ATCTTTTCTT TACACGGCCA CTGGGATACC
GATTGGGTTA ACAATCTCTC CGGCGGTATT CGTCGCGGCA ACGCGCTCGA CAGCGTCGCG
GTGGGCGGTT TTACCCTCAA GGGCGATCGT TTGGGCCTGC CCAACAGCGT GTTCAATTTC
TCACTCATGG CGACTCGCGT GGGCGACGCC AATGCAGAAT TGATCGGAGC AGACACCAAC
CCGAGCAATA TCGAAGGCAA CCGCAATCGG CTGGTGCTCA ACACCGCGTT CTGGCAACAG
GACTGGTTGA ACTCACCTCA TATCGGTCTC AACACCCGAT TGGGTGTATT CGATTTGAGC
GCTGAATTCG ATAGCACCGA TGGCGCCGCG CAATTGCTCA ACAGTTCGTT TGGTCTCGAC
CCGACGATCA CCGACAATTT CGCCGCATCG ACTTTCCCCA AGAACGGTAC CGGGCTCGTG
ACCAGCATCG CCAGCGCCAT CGATCCGGAT ACCGCCCCCT TCGCGTTAAA GGTCGGGTTG
ATTCAGGGCG ATGTCAATCA ACAAACCCAC CCATTCACTC AAGGCGTTTT GAACATCGCC
GAAGGGCAAT GGCGCCCGAG CAAAGGCACA GCCATTAAAC TCGGCGGCTG GCAAAAACGA
GGCAACGGCC TGCATGATCT GCGCGGCGGC TATCTCAGTG CCGAAACGCC GCTCAGTTCA
GAGCAACACC AGCACATCAG CGGCTTTATT CGCGCCAGCT TCGCATCTGG CATGGGTGCA
CAAACCAACG GAGCCAACCG ATACCTTGGC GCGGGCCTCA ATTGGCAAGC ACCGTTCGCA
CATCGACCGG ACGATTACCT CACGCTCGGG GCAGCCACAC TGCATTTGAA TCATGGCGGC
GATCACGAGC GGCTGCTCGA AGCGGCCTAC ATTATGCAAA TCACCCCGCG CATCTTTCTA
CAACCCGACG TGCAATACAT CCAACAAAAC AACCAGCCCG ATACCTGGGT GGCTATTGTC
CGCCTGCATC TTGAATAA
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| Protein sequence | MSRLPSYVTI LLIVLVIPPI LGSGAWATEF ILNRPAPTAA SHPLPLDESQ IFSLHGHWDT
DWVNNLSGGI RRGNALDSVA VGGFTLKGDR LGLPNSVFNF SLMATRVGDA NAELIGADTN
PSNIEGNRNR LVLNTAFWQQ DWLNSPHIGL NTRLGVFDLS AEFDSTDGAA QLLNSSFGLD
PTITDNFAAS TFPKNGTGLV TSIASAIDPD TAPFALKVGL IQGDVNQQTH PFTQGVLNIA
EGQWRPSKGT AIKLGGWQKR GNGLHDLRGG YLSAETPLSS EQHQHISGFI RASFASGMGA
QTNGANRYLG AGLNWQAPFA HRPDDYLTLG AATLHLNHGG DHERLLEAAY IMQITPRIFL
QPDVQYIQQN NQPDTWVAIV RLHLE
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