Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0167 |
Symbol | |
ID | 8533282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 169850 |
End bp | 171724 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 646382545 |
Product | ABC transporter related protein |
Protein accession | YP_003262077 |
Protein GI | 261854794 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.692888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCAAC TTCAATCCGT CAGCCTGCGG CGCGGCACCC AGTTATTACT CGAAAACGCG AATTTGACGC TTCAGCCCGG CTATCGCCTG GGTTTGGTGG GGCGTAATGG CACGGGCAAG TCGAGCCTGC TGGCGCTGTT GGAAGGCAAG CTCACGCCCG ATGCGGGGAA TGTGGATCGG GCCGGTGGGC AACGCTTGGC CACGGTGGCG CAGGAAATGG ATGATCTGGA CGTGAGTGCC GTGGAAAGCG TGCTGGCGGG AGATGTCGAA TACGATCGAA TTTCGAAAGC GATTGCCACA GCCGAGCTGG CCGAAGACGG TATGGCGCTC GCCACGCTGT ATCACGATCT TGAGGCGATT GATGGCTTTA CAGCCCGATC GCGCGCGGCG CGGTTGCTCG ATGGTTTGGG TTTTGCGCCT GATGCCATCG ACCGCCCCGT GCGGTCGTTT TCCGGTGGTT GGCGGATGCG CATCAACCTC GCTCGGGCCT TGCTTGCGCC CAGTGACATC CTGCTGCTCG ATGAACCCAC CAACCACTTG GATCTGGATG CCGTGTTCTG GCTGGAGCAA TGGTTGATCA ACTATCCCGG CAGTCTGGTG GTGGTTTCGC ATGACCGGGA TTTTCTGGAT CAGGTCTGCA CCCACATCGC CCATCTGGAA AACAAATCGC TCACGGTGTA CACCAGCAAT TACAGCGGAT TCGAGCAGAT GCGCGCCGAG CGCCAAGCGC AAAATGCCGC GCTTTCGGCG AAAATTGAGC GAGAACGCGC CCATTTGACG GCATTTGTCG ATCGTTTTCG CGCACAGGCG ACCAAAGCCA AACAGGCGCA AAGTCGCATC AAGGCCTTGG CGCGCTTGCC TGTGCTGGCC GCGACCCATG CCGACAGCAC TTTTACCTTT AGCTTTCGCC CCGCGCCGAA TTCCCCCGAT CCGCTGTTGA CGATGGAACA CCTCGAACTT GGTTACAACG GCAAGGCGTT GCTCAAAAAC ATCGACCTGA CGGTGCGCGC GGGTGATCGT ATTGGCTTGT TGGGCGCGAA CGGTGCGGGT AAAACCACCT TGATGCGGGT GTTGGGTGGC GCGGAAAAAC CGATGGCCGG TGAGCTCTTT ATTTCGGCAG GCGTTCGCGT GGGGTATTAC GCCCAGCATC AACTGGAGCA ACTGGACCCG CGTGATACGC CCATGACGGC GCTCGAGCGC ATCGCTGGCC GCGCATCTAC GCAAGAAGTG CGTAATTTCC TCGGCGGGTT CGGTTTTATC GGCGACCGTG CGTTTGAAAA CATCGAGCCG TTTTCCGGTG GAGAAAAGGC GCGTCTGGCC TTGGCCTTGC TTGTCTGGCA GGCACCGAAT CTGCTTTTGC TCGATGAGCC GACCAACCAC CTCGATCTGG AAATGCGCGA GGCATTAGCG GCGGCACTGC AAACATTCGA AGGCGCGTTG GTGGTGGTAT CGCATGATCG CAGCCTCATC GAAATGGTTT GCGATAACTT TTGGCGCGTG CATGACGGCA AAGTCGGTGT TTTTGATGGT GACCTCGACG ATTACCGCCG TGTGTTGACT GATGAGCGTC GAGCCGCGAA CGCACCTGCG AAACCAGCGG AGACGACGAA ACCCAAGAGC GAATCGACCT GGCGCCCTGC CACCAAAAAA CCGGCAGGAA AACCGGACAA ACGCACCGAT AAGCGCGTTG CGGAGATTGA GCATCGCCTG AGTGCGGTGG TGCTTGCGTT GCAGGCGCTC GATACGCAAC TGGCTGATCC GGACTTGTAT GCGGGCCCCG ATGCGACCCG TGCAAATGAG CTGACAAGCC AGCGCCAGAC GTTGGCAGAG GAGCACGAAG CATTGGAACT GGAGTGGCTG TCGCTCAACG ACTGA
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Protein sequence | MIQLQSVSLR RGTQLLLENA NLTLQPGYRL GLVGRNGTGK SSLLALLEGK LTPDAGNVDR AGGQRLATVA QEMDDLDVSA VESVLAGDVE YDRISKAIAT AELAEDGMAL ATLYHDLEAI DGFTARSRAA RLLDGLGFAP DAIDRPVRSF SGGWRMRINL ARALLAPSDI LLLDEPTNHL DLDAVFWLEQ WLINYPGSLV VVSHDRDFLD QVCTHIAHLE NKSLTVYTSN YSGFEQMRAE RQAQNAALSA KIERERAHLT AFVDRFRAQA TKAKQAQSRI KALARLPVLA ATHADSTFTF SFRPAPNSPD PLLTMEHLEL GYNGKALLKN IDLTVRAGDR IGLLGANGAG KTTLMRVLGG AEKPMAGELF ISAGVRVGYY AQHQLEQLDP RDTPMTALER IAGRASTQEV RNFLGGFGFI GDRAFENIEP FSGGEKARLA LALLVWQAPN LLLLDEPTNH LDLEMREALA AALQTFEGAL VVVSHDRSLI EMVCDNFWRV HDGKVGVFDG DLDDYRRVLT DERRAANAPA KPAETTKPKS ESTWRPATKK PAGKPDKRTD KRVAEIEHRL SAVVLALQAL DTQLADPDLY AGPDATRANE LTSQRQTLAE EHEALELEWL SLND
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