Gene Hneap_0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0148 
Symbol 
ID8533262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp143300 
End bp144247 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content59% 
IMG OID646382526 
ProductGeneral secretion pathway protein K 
Protein accessionYP_003262059 
Protein GI261854776 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3156] Type II secretory pathway, component PulK 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGTG TGAATCGCTT TGCCTCGCCG ACACGCCAGC AGGGCGTCGC TTTGATCGTG 
GCCTTGTTGG TGCTGGCCAT CGCCACCGGC TTGGCCGCTG CCGTGATGGT GCGCAATCAA
AACGCGCTCG ATGCCACCGC CGCCTTCGAA AACGGCGCGC GGGCCGATCA ATTGGCTAAC
AGCGCCTTTC TTCTCGCCAA GGCTCTGCTG GACCGGGATG ATCGCAACAG CGATGGCCCG
GCCGACCTCT GGGCGCAGCC GCTGGCGAAC ATTCCCATTG ATGGCGCGAC GGTGTCGCTG
ACCATCAGCG ATCTGCAAGG CCGTTTTAAT ATCAATAACC TGCTGCTGCC CGATGGTAAA
GTCAACCTGC TCGGTAAAGA GCGATTTGCG CGCTTACTCA ACTTGCTGAA TCTGAGCCCG
GATATCAGCA ATGAAATCAT CGGCTGGATC GATCCGAGTC GTTCGCTTTC GCTTGGATTT
AACAGTGCGG CGAGTCGCAG CGGGAATATG CCTGCCGGTC AGCCGATGAT GTCGGTGACT
GAACTGCGTT CATTGGCAGG GGTAACGCCC GCCTACTACG ATAAACTGGC GCCCTATGTG
ACGGCTTTGC CCATCGGCAC GCCTGTCAAT CTAAACAGCG CCCCGCCGCT GGTGTTGCAG
GCCATCGGCG CCAATGCCGC CAGTTTGCCG GTTGTGGCGG ATAGCAAAAC ACCGCCGCCA
AATATCGGTT CCGTGGCCGA TTTTCTGGCG CGACCGGGCT TCGCAGGCGC AGTCACGCAG
CCCGATGGCT TATCGGTAAA CAGCCAGTTT TTTCTGTGCG CGGTCACCGT GCAGTTCGAT
CAGGTGGTGC GCCACCGCTA TGCCCTGATT TATCGGCCGC AATCCGGCCC ATCCCAAGTA
ATCGCCCTGA GTAATGAACC ATGTCTGACC GGCTCTTCCT GTTTGTAA
 
Protein sequence
MTRVNRFASP TRQQGVALIV ALLVLAIATG LAAAVMVRNQ NALDATAAFE NGARADQLAN 
SAFLLAKALL DRDDRNSDGP ADLWAQPLAN IPIDGATVSL TISDLQGRFN INNLLLPDGK
VNLLGKERFA RLLNLLNLSP DISNEIIGWI DPSRSLSLGF NSAASRSGNM PAGQPMMSVT
ELRSLAGVTP AYYDKLAPYV TALPIGTPVN LNSAPPLVLQ AIGANAASLP VVADSKTPPP
NIGSVADFLA RPGFAGAVTQ PDGLSVNSQF FLCAVTVQFD QVVRHRYALI YRPQSGPSQV
IALSNEPCLT GSSCL