Gene Hneap_0147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0147 
Symbol 
ID8533261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp142542 
End bp143303 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content59% 
IMG OID646382525 
Productgeneral secretion pathway protein J 
Protein accessionYP_003262058 
Protein GI261854775 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4795] Type II secretory pathway, component PulJ 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain
[TIGR01711] general secretion pathway protein J 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTTC ACGATTCGCT TATTCAGGGC GTGGGTTCGA CTCGATGCTC AATAAAAAGA 
GCGGCGAGCG GTTTTACCCT GCTGGAATTG CTGGTGGCGA TTGCCATCTT CGCGCTGGTG
GCGGTGATGG CCTATGGCGG GCTGAATACC GTGATCAAGC AAAGCGCGAT TGTCGAGGAT
CAAATGGGCC AGTTGAACGC GATGCAAAAT GGCTTGCGGC AAATGCGCGG CGATTTGACC
TTCGCGGTGG ATCGTTTTGC CCGTGATGCC TTGGGTGGCG ATGTACCCGA GTTCGCAGGC
GGCGGCTTGA ACCTTCTGAC ACTGACCCGT TTGGGCGCAT CGAATCCTTG GGCGGCAGCC
GAGCCGCAAC TGGCGCTGGT GCGCTGGCGG CTTGAAAACG GCAATTTGGA GCGCGCAACC
TTCGTGCCGC CCGATGGCGC GGTGGGCAAC AGCGCCGAGC AGCCAGACTG GCGCATCATT
TTGCGCAACG TCAGCAAAAT TCAGCTGACT TTTTACGATC AAAACAACCA GTCGATGCTC
GATTGGCCGC CCATCAACCA ACCCTCGGCG GGCTTGCCCA AGGCGGTCGA AGTGCTGCTG
ACGGTAAACA ACCTTCCCCC CTTGCGCATG ACCGTCGCTA TGGTTTCGGA TTGGCCCGAG
GCCGCTCCTG CCAACCCGCC GGGCGGAACA AATAACGGTG CCGAGCCAGC GACAAGCCCG
CAAACTCAAA CCCAAACTGA GGTGGAGGCG GAGCGACGAT GA
 
Protein sequence
MSVHDSLIQG VGSTRCSIKR AASGFTLLEL LVAIAIFALV AVMAYGGLNT VIKQSAIVED 
QMGQLNAMQN GLRQMRGDLT FAVDRFARDA LGGDVPEFAG GGLNLLTLTR LGASNPWAAA
EPQLALVRWR LENGNLERAT FVPPDGAVGN SAEQPDWRII LRNVSKIQLT FYDQNNQSML
DWPPINQPSA GLPKAVEVLL TVNNLPPLRM TVAMVSDWPE AAPANPPGGT NNGAEPATSP
QTQTQTEVEA ERR