| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0132 |
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| Symbol | |
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| ID | 8533246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 123488 |
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| End bp | 126406 |
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| Gene Length | 2919 bp |
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| Protein Length | 972 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646382510 |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_003262043 |
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| Protein GI | 261854760 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTATGG ACACACGGGC GCAAACCAAA AAAGCACCAT GGTCTTCTTG CCGTTTCCAG
CGGTTCTGGT TGTGGGTGAC AACAAGCGCG CTGGCGTTGG TGATTGCCCA GCTGGCTCAG
GCGGATGAAT GGACGGGCGT CACCGACGAT GACTGGTTCA ACAGTGCCAA TTGGAGTTTT
TTTGTAGTGC CCACGTCGAG TTCACCAAGA TTGGTCATTA TTGACGCTGG TTCTTCGAAC
CCAGCGCGGA TTGGCGGTGC CGGTATCGAC AATGCCGAGG CGACGACAAT GGATATTGGC
GTCAACCGGA ATGGGGTATT AGAAATAGAA GGCGGTAGTC GCAGGCTTTT TAGTGGCGAT
GCAACCTTGG GTCGTTTCTG GGGTTCTCGA GGTGTGGTCG GCGTCAATGG CCCAGATGCG
CAATGGGGCA TTCTTGGGAA CCTCGTCATC GGCAACGAAG GCTCCGGGCA GATCACTCTG
GAAAATGGCG CCACGCTTGG GGTGAGCGGG AATGTCGACT TTGCTCGTTT TCGTCTTGCA
GGGTTCGGTC AAGCTTCTGA GGGTGCGTTG ATCATCAATG GCGGCAGCTT TGTTCAAGAT
CCCGATACGG GCACTTTCGG TATCGGTATT TCCGGCGATG CCACGCTGGA GATCAGTAAT
GGCGGTCAAC TGGTGAGTGG ATATACCACT CTGGGGCTCA ATGCCGACGG CACGGCAGAA
GCATCCATCT ACAGCAATGA CGCAACCCGC TTATCCCGTT GGCAGGCGAA CAACCTGCGT
ATAGGCGGTG CCGGGCAAGC CGGGTTGGCT ATAGGCCAGG GGGCGGTTGT TCACGTGGCC
GGTGATGCTT TGATCGGAGA TGAAGCCGGT TCACGAGGTA CGGTGCTCGT TTTTCGCGAG
GCATCAAGCG CAGTGGATGC CGGCATTTTG AACATCGGCG GGGCACTGGC GGTAGGCGAG
GGCGGCCACG CCTCATTGTT GATCGGCAAT GGCGGTAAGG TCGATGTGGC GGGTGTGGTT
GTCATCGCCG ATAATGCAAG CGCCTCGGGC AATCTTGTCG TTGGCTCAGC CGGGGAACTC
AATACGCATC ATGATGGTAT TTACGTTGGT GCATTAGGCG AGGGCGAACT CACGCTGAGC
GAGGGTGGCC GCGCGCTGCT CCATGGCGGC GCTGTCACGC TCGGCTTTTT TGCAGGGTCG
TCAGGCACGC TCAATATTGG TGCGGCCGAC GGCAGTGATG CCCGAGCGCC CGGTGTCTTG
GATGCTTCGA ACGTCCGCTT TGGCGCTGGG GCGGGAACGC TCGTCTTCAA TCACACAGGA
CATGATTATG TGTTCTCCAG TGATATTTCC GGCAATGGCC TCATCAAGCA TCGTGCTGGA
GGGACGACGC TGACCGGCGA TGGCAGTGCC TTTACCGGAG GTGTGTTTCT CGAAGGCGGT
CGACTGAGCG TTAATGGCCT TTTGGGCGGG GGGATTGATG TCGCGGGCGG GACGTTGGCT
GGCACAGGAC AAGTGGGTGC TGTGATCTTG CGCCGCGGTA GCCAAATCGC ACCGGGTAAT
TCCATCGGCA CACTGAAGGT AGCAGGCGAC ATCACTATCG CCCTCGGATC AGATTATGAG
GCAGAGGTCA ATGCAGCCGG TGCAAGCGAT CTCATTCACG CCACCGGAAC GGCCACCATC
AATGGTGGCT CGATCAATGT CCTTCCCTCC CCGGATTTCG CGGTCGGAAC ACCTTATACC
CTGCTCACTG CCGATGGCGG ACTGGTCGGT GCGGGATTCG ATGCGGTTAA CTTCGATTCC
CTGTTTGTCT CACCGGTTCT TTCGGACGAC GCCAATCATG TTTTTTTGAC GATTACCCAG
ACAACCGATT TTGTAGCGGT CGCACGCACG TCCAATCAGG TGGCAGCGGC AGGCGGTATC
CAGTCAGTCG CTAGCGGACT TTTGTTTGGC GCCATTGCCT CGCTTGGTGA TGCTGACGAA
GCGCGCAGGG CTTTCGATGA TATTTCAGGC GAGGTTCACG CCTCGATCAA GACGGCATTG
ATCGAGGATA CCCGCTTTGT TCGCTCGGCG ACGTTGTCAC GCCAGATCGG CGAGGGGGAA
GATAGCGGTC TGTGGACCAA GAGTTTCGGC TCATGGGGGC GCTGGGATAG CGATGGCAAT
GCGGGCGAGC TCTCGCGTCA CCTCGGTGGG TTACTGTTTG GCCGGGATAG CCTCGTGCTG
GAGGATATCC AGTTAGGCTG GGTGGCCGGT TATGCCCGCT CGTCGCTCCA TATCGATGAG
CGCGCGTCAA CTTCAACTGC TGACAGTTAC ACCCTTGGCG CCTATGTGGG GCGTCGATGG
GATGCGTTTT CACTCAAGGG TGGGGTGGCT CATAGCTGGC ATCGACTCGA TACCGCACGC
ACGGTGGCTT TCAGCGGTTT TACCGACAAT CTGTCGGCGA ATTATAGTGC CCGTGCATTT
CAGACCTATG GTGAGGCAGC CTACAGTTTG GATATCGAGG GTGCGCGCAT CGAGCCTTTT
ACCAACCTGA CGTATGTCCA TCTGAGTACG GACGTTTACA GTGAAACCGG AGGTGCGGCG
GCATTGACAG CGGCAAGTCA AAGTATCGCA GAGACATTCA CAACCATCGG ATTGCGTGGG
AAATCACAGT TCGATTTCGG CGGGGCACCG ACCCATATCA GTGGCTCGGC CGGCTGGCGA
CATGCCTTCG GAAATACACC AACCGCCACC CATCATTTTT CAGGCGCAGA CAACTTCACC
GTAACCGGCG TACCCATCGC AGTGGATGCA CTTGCACTCG ACCTCGGGGT GAGCGTGAAC
CTCACTCAAG ATGCCACGAT TGGGCTTTCT TATCATGGTC AGTTTGGGTC CAGCTTGATC
GATCAGGGGC TCAGAGCCTC TCTCAATGTT GCGTTTTGA
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| Protein sequence | MFMDTRAQTK KAPWSSCRFQ RFWLWVTTSA LALVIAQLAQ ADEWTGVTDD DWFNSANWSF
FVVPTSSSPR LVIIDAGSSN PARIGGAGID NAEATTMDIG VNRNGVLEIE GGSRRLFSGD
ATLGRFWGSR GVVGVNGPDA QWGILGNLVI GNEGSGQITL ENGATLGVSG NVDFARFRLA
GFGQASEGAL IINGGSFVQD PDTGTFGIGI SGDATLEISN GGQLVSGYTT LGLNADGTAE
ASIYSNDATR LSRWQANNLR IGGAGQAGLA IGQGAVVHVA GDALIGDEAG SRGTVLVFRE
ASSAVDAGIL NIGGALAVGE GGHASLLIGN GGKVDVAGVV VIADNASASG NLVVGSAGEL
NTHHDGIYVG ALGEGELTLS EGGRALLHGG AVTLGFFAGS SGTLNIGAAD GSDARAPGVL
DASNVRFGAG AGTLVFNHTG HDYVFSSDIS GNGLIKHRAG GTTLTGDGSA FTGGVFLEGG
RLSVNGLLGG GIDVAGGTLA GTGQVGAVIL RRGSQIAPGN SIGTLKVAGD ITIALGSDYE
AEVNAAGASD LIHATGTATI NGGSINVLPS PDFAVGTPYT LLTADGGLVG AGFDAVNFDS
LFVSPVLSDD ANHVFLTITQ TTDFVAVART SNQVAAAGGI QSVASGLLFG AIASLGDADE
ARRAFDDISG EVHASIKTAL IEDTRFVRSA TLSRQIGEGE DSGLWTKSFG SWGRWDSDGN
AGELSRHLGG LLFGRDSLVL EDIQLGWVAG YARSSLHIDE RASTSTADSY TLGAYVGRRW
DAFSLKGGVA HSWHRLDTAR TVAFSGFTDN LSANYSARAF QTYGEAAYSL DIEGARIEPF
TNLTYVHLST DVYSETGGAA ALTAASQSIA ETFTTIGLRG KSQFDFGGAP THISGSAGWR
HAFGNTPTAT HHFSGADNFT VTGVPIAVDA LALDLGVSVN LTQDATIGLS YHGQFGSSLI
DQGLRASLNV AF
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