| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0104 |
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| Symbol | |
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| ID | 8533217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 95561 |
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| End bp | 98821 |
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| Gene Length | 3261 bp |
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| Protein Length | 1086 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646382481 |
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| Product | SNF2-related protein |
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| Protein accession | YP_003262015 |
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| Protein GI | 261854732 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGCC CGATCCATCT TCCCTTCACC CTTGCCGACA TCACCGACTA TTTTGGCGCG
CATGAAATAA AGAAAGCCGA GCCGTACGCA CGTCATGCCG TTCAGCTAAT GCACGTGGAA
AATGGCTATA TCAACGCAGA AGTGCAGGGC ACAGTTAGAA CCCCCTATGA TGTTCATATC
AATTTTTATC ATGATACGGA CGGCAAAGTG TTCTTCGATG CGGAATGCAG TTGTCCAGTC
GGCTACCAAT GTAAACACGC CGCTGCCACG CTCATCGCCG CGTTGAATAA TCATCAACAC
ACTATTCCGG GCGTATCTGC TCAAACGCTG GCATGGCTGG ATCAATGGCG GCAAAGCACG
ACCAATGCGG CCAAAGCCAT GAAGGAAATG CTGGTTTACC TGCTTAAACC GCCCTCTGGC
AGAGAACTGC TTGCAAAGGT ATATCTGAAC AAAGTGCGCG TGGGCAAGGA GGGGCCGATT
CTGGAATCCG CAAAAACCTG GTACAACATT GATGGCGCGC TACGCAAACC GCCTCGTTTC
GTTCAGCAAG TCGACCGTTC TATTCTCCAC CTCATCAACG ACCAACCCTT CGGTTTTGGC
TATAACGGCT TCTCGCTTGA AAATGACTTA GGCGAGATGG CGCTCGATTT GATGTGTGAC
ACCGGTCGGC TTTACATTGA GAGAAACCAC ACGCCACTAA AACGCGGAGC AGATCGTGCA
GCGCGCCTGC AATGGCGCCG GGAGGGGGAT ACCTTGCACC CTGAATTGGT GGCCGAACCT
GAGGCAAAAC TATTCGCGCT ATCGGCATTC TGGTATCTGG ATGCGCACAC CGGTGAGGTG
GGGCGCTTGA GCACAGCCGA AGATCCGAGC AAAATCAAGC ACTTGCTCAG CATACCGCCG
GTCACCGAAC AAGCGTTGCC CTTGGTCGCA ACCGTGTTAG CCGAATCGGC GCCGGATCTG
GCTCCGCCCA TCCAAAGCGA AGCCACTGCC ACGGCCATCG ACATCGCCCC CACGCCTGTT
CTTAGCCTGC ACACGCTGGC GGCGCGGCGC ATCAATCCCT ACCGCAGCTA TGACCGTAAA
ATCGACGGAT TCGATGTGGC CGAATTTGCG TTCGACTACG ACGGGGTGAG GGTCGGCCTT
GATGATTGCA GCGGTTTGAG TCAGGACGCC CGGGGGCATT GGGTTTTCAT CAAACGTCAA
GCCGACGACG AAGCACGTTG GGCACGCCAG CTACGCAAGC ACGGCCTTAC CCGCATCCCC
GCCAATGTTC TTGATGACGC GCGCGCGTTG TATGGCCTAG AAAACGAGGC GGCATGGGTC
GAATTTATGA CCGAAGCGCT GCCCAAACTG CGCGCTGCGG GCTGGCTGGT GGAAATCCCC
GACGATTTTC GCCATGTCTG GCATGAGCCA CAAGGATGGG ATGCCACCGT CAATGAAGAG
GGGGCCGGTT GGTTTGACCT TGATCTGGGT GTGCTGATCG ACGGCCAGCG GCTTTCACTC
ACGCCCATGC TCAGTGAATT GTTCGCGCGC GAACCGCGCT GGCTGGATAG CAGCTATATC
GACGAACAGC CCGACGATGC CAGCGTGATT CTGCACAGTC ACGAAAACCT GCGTATTCGC
GTTGAAGCAG GGCGAATCAA AACGATCGTA CGCCAGCTTA TCGACTTGTT CGACCGACCG
CAGGGCGATA GCTTGCGCCT GCACACGCTC GATGCTACCC GGCTGGAAAC ACTGCCCGAA
GACATGCGAC CGAATGAGTC GATACACGCA CTGGAAGTGG CCCGGCGCAT CCGAAGCGCA
GGCGCAGCCG TCGCCGTCGA AGCACCCGAA GGGCTCGGCA TCGAACTGCG CGGCTACCAG
CGCGAAGGGC TCGGCTGGCT GAGCCACCTG CGCACGCTGG GCGTAGGTGG CATTCTTGCT
GACGACATGG GGCTGGGTAA AACCGCGCAA ACACTCGCCT TCCTGCTGCG CGAAAAACAA
CAGGGCCGTT TGGGGCATCC GGCGCTCATC GTGCTGCCCA CCTCACTTAT ATTCAACTGG
CGGCACGAAG CAAAACACAT CACACCGGCA CTGCGCGTGC TCACTCTGCA TGGCGCCAAT
CGCAGCGCAC TGTTTGATCA AATCAGCAAA CACGACATCG TGCTGAGCAC TTATCCGTTG
GTATGGCGAG ACATTGAAGC CCTGGAGCAA CACACCTGGA GCCAGCTTAT TCTCGATGAG
GCGCAAACAG TCAAAAACGC GTCCAGCCAG GCGGCCCAAG CTATTCGACG CATCAAAAGC
GAACACCGCC TCAGCTTGAC CGGCACACCG ATGGAAAACC ATCTGGGCGA ATTATGGGCA
CAGTTTGATT TTTTGCTGCC CGGTTTTCTC GGCGATAAAA CCGCGTTCAC TCGCGCGTTT
CGCACGCCCA TTGAAAAGCA TGGCGACACC ATCCGCCGAG ATCTGCTCGC CCGCCGTCTG
CGCCCCTTCT TGTTGCGGCG GCGAAAAGAA GACGTCGCGG CAGAACTCCC GCCCAAAACC
AGCATTATTC GCAGCGTGTC GCTCGAAGGC GCACAGCGCG ACCTGTACGA AACCGTCCGC
TCGGCCATGG ATGAAAAAGT GCGCCAATCC ATCGATAGCA TGGGGTTAGC GCGCAGCCAC
ATCGTCATCC TCGATGCCCT GCTCAAGCTG CGCCAGGTTT GTTGTGACCC ACGCCTGCTG
CCCAGCAGCA AAACAGGCCA AAGCGCAAAA CGCCCAACGC AAAGCGCCAA ACTTGACTTA
CTGCTCACCA TGCTGCCGGA ACTGGTCGAT GAAGGCCGCC GCATCCTCGT ATTTTCGCAA
TTCACATCCA TGCTGGCACT TATCAGCGAA GCGCTCACCA AGGCCAAACT CGCTCACAGC
ATGCTCACCG GCGAAACCCG TGATCGAGAA ACCGTCGTGC GCCAATTTCA GAACGGCGAC
ACCCCTGTCT TTCTTATCAG CCTCAAGGCC GGTGGCGTAG GCCTCAACCT CACCGCCGCC
GACACCGTCA TCCACTACGA CCCGTGGTGG AACCCCGCCG CGGAAGATCA AGCCACCGAC
CGCGCGCACC GCATCGGCCA AACCCGGCAA GTGTTCGTCT ACAAGCTGGT GACTGAAGGC
AGCATTGAAG AGAAAATCCT CGCCCTCCAG GATAAAAAGG CCAAACTCGC CGAAGGCGTA
CTGAGCGGCG ACGGCTCAGC ATTTACCAAG TTCAGCGAAG TCGACATACA AGCATTAATG
GCGCCGCTAC CCAGAGACTA A
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| Protein sequence | MTRPIHLPFT LADITDYFGA HEIKKAEPYA RHAVQLMHVE NGYINAEVQG TVRTPYDVHI
NFYHDTDGKV FFDAECSCPV GYQCKHAAAT LIAALNNHQH TIPGVSAQTL AWLDQWRQST
TNAAKAMKEM LVYLLKPPSG RELLAKVYLN KVRVGKEGPI LESAKTWYNI DGALRKPPRF
VQQVDRSILH LINDQPFGFG YNGFSLENDL GEMALDLMCD TGRLYIERNH TPLKRGADRA
ARLQWRREGD TLHPELVAEP EAKLFALSAF WYLDAHTGEV GRLSTAEDPS KIKHLLSIPP
VTEQALPLVA TVLAESAPDL APPIQSEATA TAIDIAPTPV LSLHTLAARR INPYRSYDRK
IDGFDVAEFA FDYDGVRVGL DDCSGLSQDA RGHWVFIKRQ ADDEARWARQ LRKHGLTRIP
ANVLDDARAL YGLENEAAWV EFMTEALPKL RAAGWLVEIP DDFRHVWHEP QGWDATVNEE
GAGWFDLDLG VLIDGQRLSL TPMLSELFAR EPRWLDSSYI DEQPDDASVI LHSHENLRIR
VEAGRIKTIV RQLIDLFDRP QGDSLRLHTL DATRLETLPE DMRPNESIHA LEVARRIRSA
GAAVAVEAPE GLGIELRGYQ REGLGWLSHL RTLGVGGILA DDMGLGKTAQ TLAFLLREKQ
QGRLGHPALI VLPTSLIFNW RHEAKHITPA LRVLTLHGAN RSALFDQISK HDIVLSTYPL
VWRDIEALEQ HTWSQLILDE AQTVKNASSQ AAQAIRRIKS EHRLSLTGTP MENHLGELWA
QFDFLLPGFL GDKTAFTRAF RTPIEKHGDT IRRDLLARRL RPFLLRRRKE DVAAELPPKT
SIIRSVSLEG AQRDLYETVR SAMDEKVRQS IDSMGLARSH IVILDALLKL RQVCCDPRLL
PSSKTGQSAK RPTQSAKLDL LLTMLPELVD EGRRILVFSQ FTSMLALISE ALTKAKLAHS
MLTGETRDRE TVVRQFQNGD TPVFLISLKA GGVGLNLTAA DTVIHYDPWW NPAAEDQATD
RAHRIGQTRQ VFVYKLVTEG SIEEKILALQ DKKAKLAEGV LSGDGSAFTK FSEVDIQALM
APLPRD
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