Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0060 |
Symbol | |
ID | 8533173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 68056 |
End bp | 68586 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646382439 |
Product | outer membrane chaperone Skp (OmpH) |
Protein accession | YP_003261973 |
Protein GI | 261854690 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCGCG CGGTGCGTTA CGGTTTGTCG GTTCTGGTTT TTCTGTTCGC GGCGGCTACC CAGGCTGAGG TCTTGGCCGC GCCAATCAAG GTGGGTTATG TCAATTCGGT CGCGTTGATG GAGCAGGCGC CGCAGGCGGA TATCGCCAAG CATGCGCTGG AACGAGAGTT TTCTCCTCGT GAGCGGGAGA TTCGTGCATT GCAGCAGCAG GCTCAAACGT TGCAAGGGCG ACTCGACAAC GGTGGGGCGA GTATGGGCGA CACTGAACGC AGCACGTTGC GCCAGCAACT CGACCAGAAA ATGCTTCGTA TCCAGCAAAT GCAAAGCGAT TTCCAGGACG ATCTCAACCT AAAGAAAAAC GAGGCGTTGG GCAAATTGCA GCAGGCTGTA TTGCAGGCAA TCAAGGATGT TGCCAAGACG AATGGCTATC AACTGGTGCT TTCCGACGGG GTAGTTTATG CCGCGCCTTC CGTGGACATC ACCAAGCTGG TGGCCGAGCG CTTGAAGCAA CTGGCCAAAG GGAAGCAATA G
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Protein sequence | MDRAVRYGLS VLVFLFAAAT QAEVLAAPIK VGYVNSVALM EQAPQADIAK HALEREFSPR EREIRALQQQ AQTLQGRLDN GGASMGDTER STLRQQLDQK MLRIQQMQSD FQDDLNLKKN EALGKLQQAV LQAIKDVAKT NGYQLVLSDG VVYAAPSVDI TKLVAERLKQ LAKGKQ
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