Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0043 |
Symbol | |
ID | 8533156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 50405 |
End bp | 51196 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 646382422 |
Product | HAD-superfamily subfamily IIA hydrolase like protein |
Protein accession | YP_003261956 |
Protein GI | 261854673 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
TIGRFAM ID | [TIGR01458] HAD-superfamily subfamily IIA hydrolase, TIGR01458 [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.58574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGACCA CAACGCAAGC GGTTATTTTC GATATCGGCG GCGTACTGCT CGATGGCAAT ACGCCGATGC CCGGCGCAGT CGACGCACTC GCCCGCCTAC GCGAGGCCAG CATTCCTTTT CTGCTTTTGA CCAACACCAC GCGTCGCAGT CATGCGGATT TGCTCGCCGC CCTGCATGAG GCCGGGCTGG ACGTGTCGGC GCAGCAATTG CTCACGCCCG CACGTGCCGC AGCTGCCTGG CTGCAATCCT ACCAGACGCA TGGCGTACTG CTGATTCATC CCGGATTACT GCCGGATTTT GCTGGGGTCG ATACCACGCT GATTGGGGCG AAAAGCGAAG CCACCGGGCC CCGAGCCGTC ATCGTCGGCG ATGCGGGTGA AGGCTTTACC TACACCACAC TCAACGCCGC CTTTCGGGAG CTCATGGCCG GAGCCACGCT GATCTCGCTG TCCGACAGTC GCTATTTTCG TGAAGCTGAC AGCCTGTCAC TCGATGCCGG GCCCTTCGTT CGGTTACTAG AGAACGCGGC AGGCGTCACG TCCAATGCCA TGGGTAAACC CGGTGCGTCT TTCTTCCAGC AAGCGATTGC CGCACTCGGC TTTTCAGCAG AAAACATCAC CCTGATCGGT GACGATGTGC ACAGCGATAT CCAGGGCGCA GATGCCGTCG GTTTGCAGAC CATCCTCGTG CAAACCGGCA AGTATCAGGA CGGAGATGAA GATCTGGCTC CAGAAAACAC CCTGATCGCC AAGGACGTTC TGGCGAGCGT GTATTTGCTA AATCAGCGCT GA
|
Protein sequence | MQTTTQAVIF DIGGVLLDGN TPMPGAVDAL ARLREASIPF LLLTNTTRRS HADLLAALHE AGLDVSAQQL LTPARAAAAW LQSYQTHGVL LIHPGLLPDF AGVDTTLIGA KSEATGPRAV IVGDAGEGFT YTTLNAAFRE LMAGATLISL SDSRYFREAD SLSLDAGPFV RLLENAAGVT SNAMGKPGAS FFQQAIAALG FSAENITLIG DDVHSDIQGA DAVGLQTILV QTGKYQDGDE DLAPENTLIA KDVLASVYLL NQR
|
| |