| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0033 |
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| Symbol | |
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| ID | 8533146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 39572 |
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| End bp | 41770 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646382412 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_003261946 |
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| Protein GI | 261854663 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCCGAGG CTTCCGTACC ACAACCGCAA CCGGAAAAAC TGGTTCTGGT TGCTGAAGCG
GCAGAGGCAG AAATTTATTT CGCGCCGCTG GCTATGACCT TGGCAACGTA TATCGATCCG
GAAGGCATCG CGCATGTGCG TGATGCCTTT ATTTTTGGCG CGAACTCGCA TGTCGGACAA
GCCCGTCAAA GTGGCGAGCC GTATATCAGT CACCCGGTCG CGGTTGCCGA AATCCTAGCT
GGTTTGCACA TGGACGAAGC CACCTTGACG GCCGCCATCC TTCACGACGT GATCGAAGAC
ACCGCCGTCG CCCGCGAGGA GATTGTCGCT CGCTTTGGCG AGGAGGTCGC GCGGCTGGTC
GATGGTGTAT CCAAACTGAC CCAGATCCGC TTCAAGTCCA AGGCCGAAGC CCAGGCCGCC
AACTTCCGCA AGATGATGAT GGCGATGGTT GAGGATGTGC GCGTCATTCT CATCAAACTG
GCCGATCGCC TGCACAACAT GCGAACACTG GGCGTGATGC GCCCGGACAA ACGTCGGCGC
ATCGCTCGGG AAACGCTGGA CATTTACACG CCCATCGCCA GCCGTCTTGG CCTGAATTCG
CTGCGACACG AATTGGAGGA CATGGGTTTT AGCGCCCTGT ACCCCACCCG TTATCGCGTC
ATCAGTGAGG CCGTGCGCAA GGCGAGAGGC AACCGCAAAG AAATCGTTGC AGGTATCGAG
GAGCGCTTCA TCCACCGCTT CGGCGAAGAA GGTCTGCGGG TACAGATTGA TGCCCGCGAA
AAGCGCCCGT ACTCGATCTA CCGCAAGATG ATGCAGAAAC ACCTCACGTT CAAGGAAGTG
TTTGATGTCT TCGCCGTCCG CATCGTTGCC AACAGCGTGG ATGACTGTTA CCGCGCCCTC
GGCATCGTTC ACAATCTCTA CAAGCCACTC CCAGGCCGCT TCAAGGACTA CATCGCGATT
CCCAAGGCCA ATGGTTACCA GTCACTGCAC ACCATCCTGT TCGGCCCCCA CGGCATCCCG
CTGGAAGTCC AGATTCGCAC CAACGAAATG CACCAGTTCG CCGAAAGCGG TATCGCGGCG
CATTGGCTCT ACAAATCCAG TCACGATCAA GGCACGGTTA CTCAAGCGCG CGCACGCGAA
TGGCTGCGCG ATCTGCTGGA AATCCAGCAA AAAGCGGGCA ATCCGCAGGA GTTCCTTGAG
TCGGTCAAGG TCGATCTGTT TCCGGACGAA GTTTATGTCT TCACGCCCAT GGGCGAGATC
ATCGAGTTGC CGCGCCGTGC CACCGTCGTC GATTTTGCGT ATGCCATCCA CACCGATGTC
GGCAATCATT GCGTCGCCTG CAAGATCGAT CGCCGGTTCG CCCCGCTCTC TACACCGCTG
GAGAACGGCC AGACAATCGA GATCATCACA GCAGAGGGTG CCGAACCCAA TCCGAACTGG
CTGTCGTTTG TCGTCACCGC CCGGGCGCGA GCGAATATCC GCAACTACCT CAAGAATTTG
CAGGATTCGG AGGCCATCAA GCTGGGGCAT CGTTTACTTG CCAAGTCCCT GAACGCCGAA
TCGATCGATT TCAACGACAT CAAGACCGAT CGACTCAAAC GCTTATTGGC GGAATATCAT
CACGATGGGT TGTCTGATCT GCTTCGTGAA ATCGGCCTCG GCAACCGCAT GGCGCCACTG
GTAGCACGTC TGCTCATGGC GGACGAAAAC ACGGATGAAG GCGCAGAATC GCATGGCGCA
ATGACGAGCC TCAACGCGAC TCAGACCCCC ATCATCAGCG GAACCGAAGG GCTCGTGGTC
GACTTTGCCA AGTGTTGCCA TCCGATTCCT GGCGATGCCG TAGTTGGTTT TTTAAGCACA
GGTCGCGGGA TAGTCGTCCA TCGACATGAT TGCGGCAATG CGGCCGATGT CGGGGTGCAT
CCGGAGCGCT GGTTGGCGGT CAACTGGGCC GATCCGGCCT TGGGTGATTA TCAAGCCTTG
ATTGTCATCC ACGCCAAGAA TGTCCGGGGC GGGTTGGCGC GGATCGCGAG TGCCGCAGCC
GAAACCGGCG CCGATATCGA CGACGTTCGA TTCGATGACC GTGACGTCAA TCTGACCATC
ATCACCGTGA CCCTTCGGGT AGCCGATCGG GTGCATCTGG CGCGCGTGAT GCGCCGAATC
AAACAGGTGC CGGATGTAGT GAAGGTGCTT CGCCCCTAA
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| Protein sequence | MPEASVPQPQ PEKLVLVAEA AEAEIYFAPL AMTLATYIDP EGIAHVRDAF IFGANSHVGQ
ARQSGEPYIS HPVAVAEILA GLHMDEATLT AAILHDVIED TAVAREEIVA RFGEEVARLV
DGVSKLTQIR FKSKAEAQAA NFRKMMMAMV EDVRVILIKL ADRLHNMRTL GVMRPDKRRR
IARETLDIYT PIASRLGLNS LRHELEDMGF SALYPTRYRV ISEAVRKARG NRKEIVAGIE
ERFIHRFGEE GLRVQIDARE KRPYSIYRKM MQKHLTFKEV FDVFAVRIVA NSVDDCYRAL
GIVHNLYKPL PGRFKDYIAI PKANGYQSLH TILFGPHGIP LEVQIRTNEM HQFAESGIAA
HWLYKSSHDQ GTVTQARARE WLRDLLEIQQ KAGNPQEFLE SVKVDLFPDE VYVFTPMGEI
IELPRRATVV DFAYAIHTDV GNHCVACKID RRFAPLSTPL ENGQTIEIIT AEGAEPNPNW
LSFVVTARAR ANIRNYLKNL QDSEAIKLGH RLLAKSLNAE SIDFNDIKTD RLKRLLAEYH
HDGLSDLLRE IGLGNRMAPL VARLLMADEN TDEGAESHGA MTSLNATQTP IISGTEGLVV
DFAKCCHPIP GDAVVGFLST GRGIVVHRHD CGNAADVGVH PERWLAVNWA DPALGDYQAL
IVIHAKNVRG GLARIASAAA ETGADIDDVR FDDRDVNLTI ITVTLRVADR VHLARVMRRI
KQVPDVVKVL RP
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