Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0025 |
Symbol | |
ID | 8533138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 29824 |
End bp | 30381 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 646382404 |
Product | single-strand binding protein |
Protein accession | YP_003261938 |
Protein GI | 261854655 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.326087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACTC GTGGAATCAA CAAAGTCATT GTCCTGGGCA ATCTCGGGAA AGACCCGGAA GTCCGCTACA TGCCAAGCGG CGGGCAGGTG ACGAATATTA CCGTCGCCAC CTCCGAGACC TGGAAAGACA AGGACAGCGG TGAGCAGAAA GAAAACACAG AGTGGCACCG CATCGTATTC TTTGGCAAGT TGGCGGAAAT TGCTGGTCAA TACCTGAAAA AAGGCGGCCA GGTCTATGTG GAAGGCCGTC TGCAAACCCG CAAATGGCAA GGTCAGGATG GACAGGATCG TTACACCACC GAAATCGTCG CCAACGAGAT GCAAATGCTG GGCGGTCGTG GTGGTTCGGG TGGCTCCGGC GGCGGCCAGC AAGAATCGGG CGACTATGAA GACGATGGCT ATAGCAACAC ACCGCCTGCA CGTGGCGCCG GTCGTGCCGC CGCGGCACCT GCGCGCCCGT CAAGCGGCAA CCGCGACAGC TACGGCGCCC CGCCACCACC ACCGCGCAGC CCTGCTAAAT CCGAGCCGAA CTTTGTGGAT GACGATATTC CGTTCTAG
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Protein sequence | MATRGINKVI VLGNLGKDPE VRYMPSGGQV TNITVATSET WKDKDSGEQK ENTEWHRIVF FGKLAEIAGQ YLKKGGQVYV EGRLQTRKWQ GQDGQDRYTT EIVANEMQML GGRGGSGGSG GGQQESGDYE DDGYSNTPPA RGAGRAAAAP ARPSSGNRDS YGAPPPPPRS PAKSEPNFVD DDIPF
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