Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0024 |
Symbol | |
ID | 8533137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 26886 |
End bp | 29708 |
Gene Length | 2823 bp |
Protein Length | 940 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 646382403 |
Product | excinuclease ABC, A subunit |
Protein accession | YP_003261937 |
Protein GI | 261854654 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGATC CGTTTATCCG CATTCGCGGC GCCCGCACAC ACAATCTGAA AAATATCGAT GTCGATTTAC CGCGCGATGC GCTGATCGTG ATCACGGGGT TATCCGGTTC GGGTAAGTCA TCGTTGGCTT TCGACACGCT GTTTGCTGAA GGTCAGCGCC GGTACGTGGA ATCGCTCTCG GCCTACGCGC GGCAATTTTT GTCGATGATG GACAAGCCGG ATGTGGATCA CATCGAAGGC CTTTCGCCCG CCATTTCCAT CGAGCAAAAA ACCACCTCGC ATAACCCGCG CTCGACCGTG GGTACGGTGA CGGAAATCTA CGATTATCTG CGCCTGCTCT ATGCCCGCGC CGGTATTCCC CGCTGCCCGG AACACGGCGT TGATTTAACC GCGCAAACGG TTTCGCAGAT GGTCGATCAG GTGCTGGCGC TGCCCGAAGA TTCCCGCTGG TTGCTGCTCG CGCCGGTCAT CGAGAACCGC AAGGGCGAGC ACCATAAGCT CTTCGATGAA TGGCGCTCGC AGGGCTTTTT GCGGGTGCGC ATCAATGGCA CCGTGTATGA AATCGATGAG ATTCCAGCAC TCGACCCGAA AGGCAAAAAC ACGATTGAAG TCGTGGTTGA TCGCATCAAA ATCCGCCCGG ATATTGGCCT GCGGCTGGCC GAATCGTTCG AAACCGCGTT GCGCATGGCC GATGGCCGCA CCTTTGTCGT CAATATGGAT GATGACAGCG CGCATACGTT CTCTGCCAAG CACGCCTGCC CGATCTGCGG CTATGCCCTG GCCGAACTCG AACCCCGTTT GTTCTCGTTC AACAACCCCG TCGGTGCCTG CCCAAGCTGC GATGGCCTGG GCGTAAAGCA GTTTTTCGAC CCGCAAAAGG TCATCGTCAA CGCCGAACTC TCGCTGGCCG CCGGTGCGAT TCGCGGCTGG GATCGGCGCA ATGTCTATTA CTACCAGCTT TTGCTCGGGC TATCGAAACA CTACGGCTTT GATTTAGACA CGGCCTGGCA GGATCTGCCG GAATCGATTC AAAACGCCAT TTTGCAAGGC AGTGGCCGCG AGAAAATCAC CTTCACCTAC CTCAGCCCCA AAGGTAAAGC CAGCACCAAG GATCACCCCT GGGAAGGCGT GCTGCCCAAC ATGGATCGCC GTTATCGGGA AACCGATTCG CAGGCGGTGC GCGAAGAGCT GGCCAAATAT ATTTCCGAGA GCGCTTGCCC CAGTTGCGGC GGCACCCGCC TGAACTTGGC GGCGCGAAAC GTATTCATCG AAAACGAAAA CCTGCCCGCC ATCACTCATC GCTCGATCAG CGAGGCGCTC GCGTTTTTTC AAACGCTTGA CCTGCCGGGC GCGCGCGGTG AAATTGCCGG GCGCATCGTG CGGGAAATCA GCGCGCGGCT GGGCTTTTTG AACGATGTGG GCCTCACTTA TCTCTCGCTG GATCGCTCGG CCGAAACGCT TTCCGGCGGC GAAGCCCAAC GCATTCGGCT CGCGAGCCAG ATCGGCTCGG GGCTCGTCGG CGTCACCTAC ATTCTCGATG AACCCTCTAT CGGCCTGCAT CAACGCGATA ACGACCGCTT GCTCGGCACC CTCAACCATC TGCGCGAGCT GGGCAACACC GTGATCGTGG TCGAACATGA CGAAGACGCG ATTCGGGCGG CCGATTTCGT ACTCGACATT GGCCCCGGCG CGGGCGTACA TGGGGGCCAT ATTGTGGCGC AAGGCACGCC CGAACAAATC GCCGCCAACG CCGATTCGCT GACCGGCGCG TACCTTTCCG GCAAGAAAAA AATCACCGTG CCCAAGCGTG TGACGCCCGA TGCCGAACGC TGGCTCAAGC TGTATGGCGC GCGGGGCAAT AACCTCGTCG GCGACACGCT CGAAATCCCG ATGGGGCTCC TCACCTGCAT TACCGGCGTA TCGGGTTCCG GTAAATCCAC CCTGATCAAC GACACGCTCT ATCTCATTGC CGCACGCGAT CTGAACGGTG CCAGCACGCG ACCCTCCGCG TATGAACGCA TCGAACACCT CAACCAGCTC GACAAAGTCA TCGACATCAA CCAATCCCCC ATCGGCCGCA CGCCACGCAG CAATCCGGCC ACCTACACCG GCCTGTTCAC GCCGATTCGC GAGTTGTTCG CGGGCACGCA AGAGGCACGT TCACGCGGTT ACACGCCGGG GCGGTTCTCG TTCAATGTGA AAGGCGGACG CTGCGAAGCC TGCCAGGGCG ATGGCGTCAT CAAGGTCGAA ATGCACTTTT TGCCAGATGT GTATGTTGCT TGCGATGTCT GCCACGGCAA GCGTTACAAC CGCGAAACGC TGGATATCCG CTACAAAGGC AAAACCATCA GCGACGTGCT GGCCATGACC GTCGAAGACG CCGCGCCCTT TTTCGATGCC GTGCCCGCCC TGCATCGCAA ACTCAACACA CTGCTCGATG TGGGCTTGGG CTACCTCACG CTCGGCCAAA ACGCCACCAC CCTCTCCGGC GGCGAAGCCC AGCGCGTCAA ACTCGCCAAG GAACTGTCCA AACGGGATAC CGGCAACACG TTGTATATTC TCGATGAACC AACCACCGGC CTGCATTTTG CCGACGTCGA GCAACTGCTC GCGGTACTCT ACCGCCTGCG CGATCAGGGC AACACCGTCG TGGTCATCGA ACATAATCTC GATGTAATCA AAACCGCCGA CTGGATTGCG GATTTGGGCC CAGAAGGCGG CAGCGGTGGC GGGCAAATCA TCGCCAGCGG CACACCAGAA ACCGTGGCAA AAATTGCCGG ATCGCATACC GGACGGTATC TCGCCCGATT ACTCGACCAC TGA
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Protein sequence | MADPFIRIRG ARTHNLKNID VDLPRDALIV ITGLSGSGKS SLAFDTLFAE GQRRYVESLS AYARQFLSMM DKPDVDHIEG LSPAISIEQK TTSHNPRSTV GTVTEIYDYL RLLYARAGIP RCPEHGVDLT AQTVSQMVDQ VLALPEDSRW LLLAPVIENR KGEHHKLFDE WRSQGFLRVR INGTVYEIDE IPALDPKGKN TIEVVVDRIK IRPDIGLRLA ESFETALRMA DGRTFVVNMD DDSAHTFSAK HACPICGYAL AELEPRLFSF NNPVGACPSC DGLGVKQFFD PQKVIVNAEL SLAAGAIRGW DRRNVYYYQL LLGLSKHYGF DLDTAWQDLP ESIQNAILQG SGREKITFTY LSPKGKASTK DHPWEGVLPN MDRRYRETDS QAVREELAKY ISESACPSCG GTRLNLAARN VFIENENLPA ITHRSISEAL AFFQTLDLPG ARGEIAGRIV REISARLGFL NDVGLTYLSL DRSAETLSGG EAQRIRLASQ IGSGLVGVTY ILDEPSIGLH QRDNDRLLGT LNHLRELGNT VIVVEHDEDA IRAADFVLDI GPGAGVHGGH IVAQGTPEQI AANADSLTGA YLSGKKKITV PKRVTPDAER WLKLYGARGN NLVGDTLEIP MGLLTCITGV SGSGKSTLIN DTLYLIAARD LNGASTRPSA YERIEHLNQL DKVIDINQSP IGRTPRSNPA TYTGLFTPIR ELFAGTQEAR SRGYTPGRFS FNVKGGRCEA CQGDGVIKVE MHFLPDVYVA CDVCHGKRYN RETLDIRYKG KTISDVLAMT VEDAAPFFDA VPALHRKLNT LLDVGLGYLT LGQNATTLSG GEAQRVKLAK ELSKRDTGNT LYILDEPTTG LHFADVEQLL AVLYRLRDQG NTVVVIEHNL DVIKTADWIA DLGPEGGSGG GQIIASGTPE TVAKIAGSHT GRYLARLLDH
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