| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0015 |
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| Symbol | |
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| ID | 8533128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 17753 |
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| End bp | 18331 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646382394 |
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| Product | Tfp pilus assembly protein FimT-like protein |
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| Protein accession | YP_003261928 |
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| Protein GI | 261854645 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACTAA ATCCGCACCA CGCATCCCCA GCCAGCGCAT CGACGCACCC TCGCGGCAGC
CAAAGCCGAT ACCGTCGAAT GCGCGGGTTT ACCATTATCG AGCTGATGAT CACCTTGGTC
GTCGCCGCCA TTCTGTTGGC GATTGCGATT CCGAGTTTTA CTTATCTTAC GGTGAGCAAC
AAGCTTACAA CCAGCGCGAA CAGTTTGGTG AGCAACCTCG CCATTGCGCG CATGGCGGCC
ATCAAGCGTA ATGCCGATGT GGGTGTGTGC GGCGATAATA CGTGCAGCGT GAACTTTCCG
GCGGGCAGCG CCACTGTCAT TCATGTGGGT ATTTCTAGCA TTCAGCCTGG TGTGATTGAT
ATCAAAAATG TCAAGGCGTT GGACTATGGT GCTCAAGGAT TAGCGCACAC CACCACATCC
ACCGCGCCTT ACAACGGCCT GATTGCCGAT ATTTATACAG GCCAGATTTC CAGCAATAAC
CACCGTTGTG TTTATCTTAC TTCCGGCTCG GTGGTGTCTA CATGCACAGA AAGTAATGCG
AATTGTGCCC TAGGAGGTCC CAGTGGAACC TGTCAATAA
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| Protein sequence | MRLNPHHASP ASASTHPRGS QSRYRRMRGF TIIELMITLV VAAILLAIAI PSFTYLTVSN
KLTTSANSLV SNLAIARMAA IKRNADVGVC GDNTCSVNFP AGSATVIHVG ISSIQPGVID
IKNVKALDYG AQGLAHTTTS TAPYNGLIAD IYTGQISSNN HRCVYLTSGS VVSTCTESNA
NCALGGPSGT CQ
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