Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0008 |
Symbol | |
ID | 8533121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 9655 |
End bp | 12165 |
Gene Length | 2511 bp |
Protein Length | 836 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 646382387 |
Product | protein of unknown function DUF214 |
Protein accession | YP_003261921 |
Protein GI | 261854638 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATAG TAGAGCCGCC AAAACCTGCA ACGCATTTGG GTTTGCCGCG CTTAATTTTG CTGGCATGGC GCGGTTTATG GCGCGAACTG CGTAGCGGCG CGTTGGTTAC GATGTTTCTG GCGCTGGTTA TTGCGGTGTC CGCCGTGACG GCGGTCGGAT TTTTTACCGA TCGAGTGGAT GCCGGTATGC GGGCGCAGGC CGCTGAATTT CTGGCCGCCG ATGGGCGAGT CGAATCACCG GATTCACTAT TAAAATGGCA GCAAAAGGCG TCAGAGCTTG GCCTGACGAC AACGCAAACG CTGGAATTTC CCACCGTTAT TCTCGCCGGT GAACATACCC TGCTGGTGAG CTTGAAGGCT GTGGGCGCGG GGTATCCCTT GCGCGGTGCG CTGACCATTT CGACAGGTGC GCAACAGCAA AAAATCCAGC AGGAGCCACG TGAAGGCCAT GCTTGGCTGG CACCGCGGGC GCTGGCTTTA CTTGATCTTA AGGTGGGCGA TTCGTTTCAG ATCGGCCAGA AAAAATTTAC GGTTTCCGCC ACTTTGCAAC GTGAGCCGGA TGTGGGTAAT TTTCTGGCGC AAGCCGCGCC GCGCGCCATG ATCAACCTCG CCGATATTCC AGCCACCGGG CTGGTTACGC CTGCAAGCCG CGTCACGCAT TATTTGTTAC TTGCAGTGCC GAGCGGTGTT AGCACAAACG TTCTTCAAGC GTTCGGTAAA TCTCTGCCCG CCGACTTGAG TCTGGAACGC CCGGAAAATA GCCAGCCTGC ATTCAAAACA GCATTTGATC GTGCCGCGCG CTTTTTGGGA TTGGCTGCAA TGGTGGCTGT TTTATTGGCG GGCGCGGCCT TAATGCTTGC CGCGCAACAG TACAATCGCT TGCAGCAAGA TCCGGCCGCC TTGATGCGCG CATTCGGGGT GCAATCCCGC CATATTCTTT ATTTGTACAC ATTGCGGCTG GTTTTTCTGG CCTTGCTGGC CGCTGTGCCC GGCATTGCGC TGGGTGGGTT GGCTCAATTC GGGCTTTCTG CCTTGCTGGG CTCTCTGCTT GATTTTCAAC TGCCGCCGCC TTCATGGCTG CCCGTGGGGT TTGGCGTGAG CATTGCGCTG GTCGCCTTGT TGGGATTTGC ACTGCCCTCG CTCATCCGCT TGCAGGATAC GCCGCCTTTG CGGGTTTTAA ACAGGCAATT GGCTGCACCG CCAACAGCCG CGGTTTTGTT GTTCGGCGCG GGGCTGCTTG CCATTGGTTT GCTGGTGTGG CTGCAAGCAC GGGATGCCTG GCTTACAACG TATGTTACCG GCGGGATGGT CATTAGTTTC GCTGCGTTCA TCGGCATCGT GTGGCTGCTG TTACAAGCAT TAAGACGCTA TCCCGCCCGA GGCGTGGCCC GTTTTGGACT GGCGCGTCTG GCGCGGTCGC CGTGGTCCAG TGCGATGCAG ATCGCGGCTT TGACCTTGGG ATTAACCGCT TTGCTTCTGC TCGGTGTGGT GCGTGGTGAT CTGGTATCCA CCTGGCAAAA TCAGATTCCG AACGATGCGC CCAATTTTTT TGCGATCAAC ATTCAGCCAG ATCAAGTGCC TGAGTTAACT CGGTTTTTTC AGACGAACCG TATCGACGAT GCCGGCCTTG TCGCCATGCA CCGCGCCCGC TGGACGTCAT TTAACGGCAA GGCCGTGAAC GCTGATCAAC TCACCGGGCA AGCGAAGCGA CTGGCGGAAC GGGAATTTAA TTTGTCGGTC ATGCCCGAGC ATCTGGCAGC CGATAACAAG ATTGTGGCGG GCAGCTGGCA GCCCGATGCG CAGGATGCGG GCTGGTCGGT TGAACAAGGC ATTGCTAAAA CGCTGCAATG GCAACTTGGC GACCGGCTTA CGTTTGTGGT GAACGGCGCA CCCGTGACCG CCGCCATTAC CAGCATCCGT ACAGTTGACT GGAATTCGAT GCGGCCCAAT TTTTTCGTGT TGGGGAGCGC GGTTTTATTG CCCCGCCAAT CGGCGCAGTT CATCACCAGC TTTTTTCTCC CCAGCCCCAA TGTAGAACAA CAAAAGGCGC TGTTACGCGC GTTCCCGACG CTGACGTTAT TTGATCTGAA CCAGATTCTC AATGAGGTGC GCACACTGAT TCTTCGAGCG AGTCAGGCCG TGCAATATGT ATTTTTATTC ACCCTGTTGG CGGGATTGGT TGTCTTGCTC AGTGCCTTTG CTGCCGGAGA GGCGGAACGT ATCCGTGAAA CAGCCGTGCT GCGCGTGCTG GGCGCAAGCC ACCGGCAAAT CATGAACAGC CTTTGGTTTG AGTTTATCCT GATCGGCTTG CTTTCCGGGC TTTTGGCCTC GATTGCCGCC GGTGGGTTGG GCGCTTTGTT GGCGCTAAAA CTGTTTGATT TACCCTGGGC ACTGGATTGG CGCATACCGC TGTATGGCTT GGCTGCGGGC GTGCTGCTCG CGGCGTTGTT TGTGCCCTAT CTGGGGAGGC GGGTGCTTGC ACTGCCACCG GCACGGTCGC TGCGGGGCTA G
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Protein sequence | MAIVEPPKPA THLGLPRLIL LAWRGLWREL RSGALVTMFL ALVIAVSAVT AVGFFTDRVD AGMRAQAAEF LAADGRVESP DSLLKWQQKA SELGLTTTQT LEFPTVILAG EHTLLVSLKA VGAGYPLRGA LTISTGAQQQ KIQQEPREGH AWLAPRALAL LDLKVGDSFQ IGQKKFTVSA TLQREPDVGN FLAQAAPRAM INLADIPATG LVTPASRVTH YLLLAVPSGV STNVLQAFGK SLPADLSLER PENSQPAFKT AFDRAARFLG LAAMVAVLLA GAALMLAAQQ YNRLQQDPAA LMRAFGVQSR HILYLYTLRL VFLALLAAVP GIALGGLAQF GLSALLGSLL DFQLPPPSWL PVGFGVSIAL VALLGFALPS LIRLQDTPPL RVLNRQLAAP PTAAVLLFGA GLLAIGLLVW LQARDAWLTT YVTGGMVISF AAFIGIVWLL LQALRRYPAR GVARFGLARL ARSPWSSAMQ IAALTLGLTA LLLLGVVRGD LVSTWQNQIP NDAPNFFAIN IQPDQVPELT RFFQTNRIDD AGLVAMHRAR WTSFNGKAVN ADQLTGQAKR LAEREFNLSV MPEHLAADNK IVAGSWQPDA QDAGWSVEQG IAKTLQWQLG DRLTFVVNGA PVTAAITSIR TVDWNSMRPN FFVLGSAVLL PRQSAQFITS FFLPSPNVEQ QKALLRAFPT LTLFDLNQIL NEVRTLILRA SQAVQYVFLF TLLAGLVVLL SAFAAGEAER IRETAVLRVL GASHRQIMNS LWFEFILIGL LSGLLASIAA GGLGALLALK LFDLPWALDW RIPLYGLAAG VLLAALFVPY LGRRVLALPP ARSLRG
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