| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4532 |
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| Symbol | trkD |
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| ID | 8532982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 4973994 |
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| End bp | 4975862 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | potassium transport protein Kup |
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| Protein accession | YP_003261829 |
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| Protein GI | 261823723 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.336747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCAG AACATAAACG TTCGCTCCCG GCTGTCACGC TGGCGGCCAT CGGGGTGGTT
TATGGAGATA TAGGAACCAG CCCTCTTTAT ACGTTAAGGG AATGTTTATC CGGGCAGTTT
GGTTTTGGGG TCGAGCCTGA TTCGGTCTTT GGCTTTCTTT CACTGATCTT TTGGCTGTTA
GTCCTCGTGG TTTCGCTGAA ATATCTCACC TATGTGATGC GTGCCGATAA CGCAGGCGAA
GGTGGGATTC TCACCCTCAT GTCGTTAGCC GGGCGCAATA CCTCCGATCG CATGACGTCC
GTGCTGGTCA TTATGGGGTT GATCGGCGGC AGCTTCTTCT ATGGGGAAGT CGTCATCACG
CCAGCCATCT CGGTGATGTC GGCGATGGAA GGGCTGGAAA TCGCCGCGCC GTCGATGGAC
AGTTATATCG TCCCGCTCTC GATTGTCGTT CTGACATTAC TGTTTATCAT TCAAAAACAC
GGTACTGGCA GCGTCGGTAA GCTGTTTGCA CCCGTGATGC TGGTTTGGTT TTTGACGCTC
GGCGTACTGG GTGCGCGCAG CATTATCGCT AACCCTGAAG TGTTGCAGGC GTTGAATCCG
ATGTATGCCG TTCGCTTCTT TATCGAATAC AAAGCGGTGT CGTTCTTTGC GCTGGGCGCG
GTGGTGCTGG CGATTACCGG TGTCGAGGCG CTGTATGCCG ATATGGGCCA CTTTGGTAAA
TTCCCGATTC GTCTGGCCTG GTTTACGGTA GTGCTGCCGT CGTTGGTATT AAATTACTTC
GGGCAGGGCG CACTGCTGTT AAAAGACCCG GAAGCCATCA AAAACCCGTT CTTTCTGCTG
GCGCCAGATT GGGCATTAAT TCCACTGATG ATACTGGCGA CTCTGGCGAC GATTATTGCC
TCACAGGCAG TGATTTCAGG CGTTTTTTCC CTGACACGTC AGGCAGTGCG GCTGGGTTAT
TTGCCGCCGA TGCGTATCGT ACACACGTCA GATATGGAAT CCGGTCAGAT TTATATTCCT
GCCATTAACT GGATGCTCTA TATCGCCGTT GTCATCGTGA TTGTTAGCTT TGAGCATTCG
AGCAGCCTGG CTGCGGCTTA CGGTATTGCG GTAACGGGCA CGATGGTGAT TACCAGCATT
CTGTTCTGTA CGGTCGCGGT GAAGAACTGG CTTTGGAATC GTTATCTGGC ATGGGTTTTG
TTGGCGGGTT TGCTGATGAT TGACCTGCCA ATGTTTTTGG CGAACGTGGT CAAGATCTTG
TCCGGCGGTT GGCTGCCGCT GGCGCTGGGC ATGGTGATGT TTATTATCAT GACGACATGG
AAAAGTGAGC GTTTCAGGTT ACTGCGTCGG TTGCATGAGC ATGGTAACTC GCTGGATGCC
ATGATTGCCT CGCTGGAGAA ATCACCACCG ACACGGGTTC CTGGTACGGC AGTGTATTTC
TCGCGTGCGA CTCGTGTGAT CCCGTTCGCG TTGCTGCATA ACCTCAAACA CAACAAAATC
CTGCACGAAC GGGTGGTGCT GTTGACCATG CGAACGGAAG ATGCTCCTTA TGTGCTGAAT
GCCCGTCGCG TGACGGTTGA ACAGCTTTCG CCAACATTTT GGCGCGTGAT CGCCAGCTAT
GGCTGGCGTG AAACGCCGGA TGTAGAAGAG GTCTTTCAGC GCTGTTGGCA GGATGGGTTA
ACCTGCCAGA TGATGGAAAC GTCTTTCTTT ATGTCCAATG AATCGCTGAT TATCGGTGAG
CGTCCGTGGT ATCTGCGCTT GCGCGGTAAG CTGTTCATGA TGCTCAGCCG CAATGCGCTA
CGGGCGGCGG ATCAGTTTGA AATACCGCCA AACAGGCTTA TTGAACTAGG GATTCAGGTC
GAGATTTAA
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| Protein sequence | MSSEHKRSLP AVTLAAIGVV YGDIGTSPLY TLRECLSGQF GFGVEPDSVF GFLSLIFWLL
VLVVSLKYLT YVMRADNAGE GGILTLMSLA GRNTSDRMTS VLVIMGLIGG SFFYGEVVIT
PAISVMSAME GLEIAAPSMD SYIVPLSIVV LTLLFIIQKH GTGSVGKLFA PVMLVWFLTL
GVLGARSIIA NPEVLQALNP MYAVRFFIEY KAVSFFALGA VVLAITGVEA LYADMGHFGK
FPIRLAWFTV VLPSLVLNYF GQGALLLKDP EAIKNPFFLL APDWALIPLM ILATLATIIA
SQAVISGVFS LTRQAVRLGY LPPMRIVHTS DMESGQIYIP AINWMLYIAV VIVIVSFEHS
SSLAAAYGIA VTGTMVITSI LFCTVAVKNW LWNRYLAWVL LAGLLMIDLP MFLANVVKIL
SGGWLPLALG MVMFIIMTTW KSERFRLLRR LHEHGNSLDA MIASLEKSPP TRVPGTAVYF
SRATRVIPFA LLHNLKHNKI LHERVVLLTM RTEDAPYVLN ARRVTVEQLS PTFWRVIASY
GWRETPDVEE VFQRCWQDGL TCQMMETSFF MSNESLIIGE RPWYLRLRGK LFMMLSRNAL
RAADQFEIPP NRLIELGIQV EI
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