Gene Pecwa_4494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_4494 
Symbol 
ID8532938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp4928662 
End bp4930761 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content52% 
IMG OID 
Productbifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 
Protein accessionYP_003261793 
Protein GI261823687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTACATTT TTGAAAGCCT TAATCTGCTG ATTCAACGTT ATCTGCCCGA AGATCAGATC 
AAACGTTTAC AGCAGGCTTA TCTGGTTGCA CGTGATGCTC ACGAGGGGCA GACTCGCTCC
AGCGGTGAAC CCTATATCAC ACACCCTGTT GCCGTCGCCT GTATTCTGGC GGAGATGCGT
CTCGATTACG AAACGCTGAT GGCAGCACTG CTGCATGATG TTATAGAGGA CACCCCCGCC
ACCTATCAGG ACATGGAACA GCTTTTTGGT AAAAGCGTTG CTGAACTGGT AGAGGGCGTT
TCCAAGCTGG ACAAACTGAA GTTCCGCGAT AAGAAAGAAG CGCAAGCTGA GAACTTTCGC
AAAATGATCA TGGCGATGGT GCAAGATATT CGCGTCATCC TGATCAAGCT TGCAGACCGC
ACCCATAACA TGCGCACGTT GGGCTCATTA CGCCCGGACA AACGCCGCCG CATTGCCCGC
GAAACGCTGG AAATATACAG CCCGCTGGCA CATCGGTTGG GTATTCATCA TCTTAAAACC
GAGTTGGAAG AACTGGGTTT TGAGGCGTTG TATCCGAACC GTTATCGCGT AATTAAAGAG
GTCGTTAAGG CCGCACGCGG TAACCGTAAG GAAATGATTC AGAAAATCCT GTCGGAAATC
GAGGGGCGTT TGACTGAAGC CGGGATTGCC TGCCGCGTCA GCGGTCGCGA AAAGCATCTG
TACTCCATCT ACTGCAAAAT GCACCTGAAA GAGCAGCGTT TTCACTCCAT CATGGATATC
TACGCGTTTC GGGTCATCGT CAAAGAGTTG GACACGTGCT ATCGCGTACT CGGTCAGGTT
CACAGCCTGT ATAAGCCACG CCCTGGCCGG GTGAAAGATT ATATCGCTAT TCCCAAAGCT
AACGGCTATC AATCACTGCA TACGTCTCTG ATTGGCCCGC ATGGCGTGCC AGTCGAAGTG
CAAATTCGCA CCGATGACAT GGATCAAATG GCGGAAATGG GCGTCGCCGC GCATTGGGCC
TATAAAGAAG GCGAGAGCAG CACGACGGCA CAGGTACGTG CCCAACGCTG GATGCAAAGT
CTACTGGAAC TCCAGCAAAG CGCTGGTAGC TCATTCGAAT TTATCGAAAG CGTTAAATCC
GACCTCTTCC CTGACGAGAT GTACGTCTTT ACGCCGGAAG GCCGCATTGT GGAACTCCCC
GCAGGCGCGA CGCCCGTCGA TTTCGCCTAC GCGGTACACA CCGATATCGG CCATGCCTGC
GTCGGTGCAC GTGTTGACCG TCAGCCTTAT CCGCTGTCAC AGTCACTCTC CAGCGGTCAA
ACCGTTGAAA TTATTACCGC GCCGGGTGCC AGGCCGAATG CCGCGTGGCT TAACTTTGTA
GTTAGCTCCA GAGCACGTTC CAAAATCCGT CAGATGCTGA AAAACCTCAA ACGTGATGAT
TCTGTGAGCC TCGGCCGCCG TTTACTGAAT CACGCATTGG GCAATGGCCG CAAACTCTCC
GATATCCCTG AAAAGTCGAT TCAGTTGGAG CTTGAGCGCA TGAAGCTCGC TACGCTGGAC
GATCTGATGG CAGAAGTTGG TATGGGTAAT GCCATGAGCG TTGTTGTGGC GAGAAATCTG
CTGAACGAGC AATCTGAACT GGGAACCACC GGGCTGCGCA AGTTGCCGAT CAAAGGCGCA
GACGGCGTGA TGCTCTCCTT TGCCAAATGC TGCCGCCCCA TCCCCGGCGA TCCTATCATT
GCCCACGTCA GCCCTGGCAA AGGGCTGGTG ATCCACCATG AATCCTGTCG CAACATTCGC
GGTTATCAGA AAGAACCGGA AAAATTCATG GCGGTAGAAT GGGATAAGGT GACAGAACAA
GAGTTCATCG CCGAAATTAA AGTCGATATG TTCAACCATC AGGGCGCACT GGCGAATCTG
ACGGCAGCGA TCAACGCCGC GAATTCCAAT ATTCAGAGCA TCAACACGGA AGAGAGAGAC
GGCCGCGTAT ACAGTGCCTT TATCCGCCTC ACAACCCTTG ATCGCGTTCA TCTGGCTAAT
ATTATGCGTA AAATTCGCGT AATGCCGGAT GTTATCAAAG TTAACCGTAA CCGAAATTAA
 
Protein sequence
MYIFESLNLL IQRYLPEDQI KRLQQAYLVA RDAHEGQTRS SGEPYITHPV AVACILAEMR 
LDYETLMAAL LHDVIEDTPA TYQDMEQLFG KSVAELVEGV SKLDKLKFRD KKEAQAENFR
KMIMAMVQDI RVILIKLADR THNMRTLGSL RPDKRRRIAR ETLEIYSPLA HRLGIHHLKT
ELEELGFEAL YPNRYRVIKE VVKAARGNRK EMIQKILSEI EGRLTEAGIA CRVSGREKHL
YSIYCKMHLK EQRFHSIMDI YAFRVIVKEL DTCYRVLGQV HSLYKPRPGR VKDYIAIPKA
NGYQSLHTSL IGPHGVPVEV QIRTDDMDQM AEMGVAAHWA YKEGESSTTA QVRAQRWMQS
LLELQQSAGS SFEFIESVKS DLFPDEMYVF TPEGRIVELP AGATPVDFAY AVHTDIGHAC
VGARVDRQPY PLSQSLSSGQ TVEIITAPGA RPNAAWLNFV VSSRARSKIR QMLKNLKRDD
SVSLGRRLLN HALGNGRKLS DIPEKSIQLE LERMKLATLD DLMAEVGMGN AMSVVVARNL
LNEQSELGTT GLRKLPIKGA DGVMLSFAKC CRPIPGDPII AHVSPGKGLV IHHESCRNIR
GYQKEPEKFM AVEWDKVTEQ EFIAEIKVDM FNHQGALANL TAAINAANSN IQSINTEERD
GRVYSAFIRL TTLDRVHLAN IMRKIRVMPD VIKVNRNRN