Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4484 |
Symbol | |
ID | 8532927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4916485 |
End bp | 4916922 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | UspA domain protein |
Protein accession | YP_003261783 |
Protein GI | 261823677 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTTACA AACACATCCT TATTGCTGTT GACCTTTCTC CAGAAAGCAA AGTGTTAGTG GAAAAAGCGG TATCAATGGC AAGACCGTAC AATGCAAAAG TCTCGTTAAT CCACGTCGAT GTGAATTACT CCGATCTCTA CACGGGGCTT ATTGACGTCA ATTTGGGTGA CATGCAACAG CGTATCTCCG AAGAAACCCA GAATGCGTTG ACTGAACTGT CCCAAAATGC GGGCTATCCT ATCAGTGAAA CGCTGAGCGG CAGCGGAGAT TTAGGGCAGG TTCTGGTGGA TGCGATCAAG AAATATGATG CCGATCTCGT GCTGTGCGGG CACCATCAGG ACTTCTGGAG CAAACTGATG TCTTCTGCAC GTCAACTGAT TAATACCGTC CATGTCGACA TGCTCATCGT GCCGTTGCGT GATGAGGAAG ACGAATAA
|
Protein sequence | MAYKHILIAV DLSPESKVLV EKAVSMARPY NAKVSLIHVD VNYSDLYTGL IDVNLGDMQQ RISEETQNAL TELSQNAGYP ISETLSGSGD LGQVLVDAIK KYDADLVLCG HHQDFWSKLM SSARQLINTV HVDMLIVPLR DEEDE
|
| |