Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4378 |
Symbol | |
ID | 8532821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 4801733 |
End bp | 4802743 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | Lipopolysaccharide glucosyltransferase I |
Protein accession | YP_003261677 |
Protein GI | 261823571 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.993607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCTTTT CATCACATAT TGATGTACTT TCAGTTTTTG AAAAAAGGCA TCAATCCATC GCCGATCATG ACACGCTAAA CGTTGCTTAC GGCATAGATA AAAACTACGC CGTTGGTTGT GGGGTATCAA TAACATCAAT TCTCATCAAT AATAGCATCG ATTTTACATT CCATGTTTTT TCTGATGACT TTGATGATGA TTTTATTAAA AAAATAAGCA TCCTCGCTGA AAAATTTAAA ACTAAAATAA TTTTATATAA AATAAATTCT GAAATGTTGA AAACGTTGCC TTGCACTGAT ATTTGGTCGC ATGCTATGTA TTTCAGATTA TTAGCCTTTT CCCATCTTTC AGATAAAACA TCAAGCCTAC TCTATCTTGA CGCCGATGTG ATGTGTAAGG GCTCTTTAGA ACAGCTTCAC AAGCTGAATA CCGCACCGCA TGTTGCTGCT GTAATTCGTG ATGTGCCTGA AATGCAAAAA AAATCGGCAA GCCGATTAAA GATGGCTGCC CTAGAGGGAG AATACTTTAA CTCTGGCGTT CTATTTGCAA ATTTGGATAT CTGGAATAAA TTAGATCTCA CACAAAAAAT ATTTGATAAG TTAAGAGATG GTGAGGAGTC AATTCAATAC CCAGACCAAG ACATTATGAA CATCCTATTA AATGGTAACG TAACTTTCCT TCCCAAAGAA TATAACACTA TTTATTCTAT AAAAAATGAA CTGAAAGATT CAAACCATCA AAAATATAAA GAAGTCATAA AAGACGATAC CATCCTCATA CATTATACCG GCGTCACTAA ACCGTGGCAT AAATGGGCAA ATTACCCATC AACATCATAC TTTCAACACG CCCAGGAAAA CTCCCCTTGG TCCACCAGCG ATCTGAAAGA TGCTGATACA TTCGTAGAGA TGAAAAAGAA ATACAAACAC TTATTGAAAA AAGGAAAATA TCTATCTGGG TTGATTTCCG CTTTTAAATA CTCTCTAAAT AAATATATTA AAAAAATGTA A
|
Protein sequence | MVFSSHIDVL SVFEKRHQSI ADHDTLNVAY GIDKNYAVGC GVSITSILIN NSIDFTFHVF SDDFDDDFIK KISILAEKFK TKIILYKINS EMLKTLPCTD IWSHAMYFRL LAFSHLSDKT SSLLYLDADV MCKGSLEQLH KLNTAPHVAA VIRDVPEMQK KSASRLKMAA LEGEYFNSGV LFANLDIWNK LDLTQKIFDK LRDGEESIQY PDQDIMNILL NGNVTFLPKE YNTIYSIKNE LKDSNHQKYK EVIKDDTILI HYTGVTKPWH KWANYPSTSY FQHAQENSPW STSDLKDADT FVEMKKKYKH LLKKGKYLSG LISAFKYSLN KYIKKM
|
| |