Gene Pecwa_4257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_4257 
Symbol 
ID8532700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp4703358 
End bp4705190 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content55% 
IMG OID 
Producttype VI secretion system Vgr family protein 
Protein accessionYP_003261588 
Protein GI261823482 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAACA GTACAGGATT GCAGTTCACT GTAAAGGTCG GCGCGTTGCC GGCCTCGACG 
TTTGCGGTGG TCGATTTTCA GCTCAGCGAG GCGCTTAACC GGCCTTTCAG CCTATCGCTG
AGTCTGGCCA GCGCCCTGCC GGATGTGGAT TTTGGCGCGG TGCTGGACCA GCCGTGCGAG
CTGATGATTT GGTATGAGGG TGAGCTAAAG CGTCGGGTCA GCGGGATTAT CAGTGGTTTC
ACACAGGGCG ACACCGGTTT TCGCCGCACC CGCTATCAGG CGGAAGTGCG CCCGGCGCTG
TGGCGGCTGG GCTTACGTAC CAACGCCCGC ATCTTTCAGG CGCAGAAGCC AGAGGCGATT
ATCGGCACCC TGCTGGAAGA AGCCGGGATT ACCGACTACG CCTTCTCGTT ACGTCATGAC
CATGCCCCGC GTGAATACTG CGTGCAGTAC CGGGAAAGTG ATTTGGCGTT TGTCACCCGA
CTGGCCGCAG AGGAAGGCCT GTACTTCTTC CACGAATTTG AGGAAGGTAA ACACCGGGTG
GTCTTTGCCG ACGATGCCGG CGCATTGGCC AAAGGCCCTG AGTTGTTCTT CAATTTGGCG
ACACAGGGGC TGAGTGAGGG CGAATATGTC CGGCGTTTCC ACTATGCCGA GCGGGTGAGT
ACGGCAGAAG TGGAATTGAA GGATTACAGT TTCAAAACAC CAGCTTACGG GCTGTCACAC
AAGAAGATGA GCAGCGAACT GGCGCACCAA CGTGAAAGCT ATCAGCATTA CGACTATCCA
GGGCGTTATA AACAAGATCC GAGCGGCAAA GCGTTCAGCA ACTACCAGTT GGATGCACTG
CGTTCAGAGG CGGTGACAAG CCAAGGGGAA TCGAACTGCG CGGGGCTGAT GCCGGGCCGT
CGCTTCACGT TAACCGAACA TCCGAATGCA ACTCTGAATG CAGTGTGGCA AACGGTGAGC
GTGACGCATA TCGGGCAGCA GCCACAGGCG CTGGAAGAAG AAAGCGGCGG CGAGCCAACG
ACCATGAGCA ACAGTTTTGA AGTTATCAGT GCAAAAAAAA ACTGGCGAGC CATCATGCCG
TACAAACCCA TGGTGGATGG CCCACAGATT GCCACGGTGG TAGGGCCGAC TGGCGAAGAA
ATCTACTGTG ACCAGTACGG CAGGATCAAA CTGCAATTCC CGTGGGACCG CTACGGCGCA
AGTGATGACC AAAGCTCCTG CTGGGTGCGA GTGAGTCAGG GCTGGGCGGG CAGCCAGTAC
GGCATGATAG CCATCCCGCG CATCGGCCAT GAAGTGATTG TCAGCTTCCT CGAAGGTGAC
CCGGACCAGC CGATTGTCAC CGGCAGAACC TTTCATGTAA CTAACCGCCC TCCTTATGAG
TTGCCCACCC ACAAGACGCG TACCGTTCTT CGTTCAAGAA CGCATAAAGG AAAAGGCTTT
AACGAACTGA GCTTTGAAGA TCAGTCTGGA CAGGAAGAAG TATTTATCCA CGCCCAGAAA
GACATGAACA CCGTGGTGCT CAATAACCGC AGCACAAAGG TGAACATCGA CCACAGTGAA
AATGTGGGTC GTCATCAGAC AATCATGGTT GGCGAAAATC AGGGAACAGA AATCAGAGGC
GCCCAGAAGA TCACGGTGGC AAAGGGCCGC AAGACCGAAA TCACCACGAC TGAAGAACTG
ACCGTAACCG GAGATATTAC CGTGCTGTCA GCCAGCGGCA CGATCAAATT ATCTACCGCC
GGTGGATATA TCTCTATTGA TAATGCTGGC GATATCAACA TTGTCGGCAA CCACCTGATG
CTGAATGGCG TACGCATCGA TTTGAACCAG TAG
 
Protein sequence
MANSTGLQFT VKVGALPAST FAVVDFQLSE ALNRPFSLSL SLASALPDVD FGAVLDQPCE 
LMIWYEGELK RRVSGIISGF TQGDTGFRRT RYQAEVRPAL WRLGLRTNAR IFQAQKPEAI
IGTLLEEAGI TDYAFSLRHD HAPREYCVQY RESDLAFVTR LAAEEGLYFF HEFEEGKHRV
VFADDAGALA KGPELFFNLA TQGLSEGEYV RRFHYAERVS TAEVELKDYS FKTPAYGLSH
KKMSSELAHQ RESYQHYDYP GRYKQDPSGK AFSNYQLDAL RSEAVTSQGE SNCAGLMPGR
RFTLTEHPNA TLNAVWQTVS VTHIGQQPQA LEEESGGEPT TMSNSFEVIS AKKNWRAIMP
YKPMVDGPQI ATVVGPTGEE IYCDQYGRIK LQFPWDRYGA SDDQSSCWVR VSQGWAGSQY
GMIAIPRIGH EVIVSFLEGD PDQPIVTGRT FHVTNRPPYE LPTHKTRTVL RSRTHKGKGF
NELSFEDQSG QEEVFIHAQK DMNTVVLNNR STKVNIDHSE NVGRHQTIMV GENQGTEIRG
AQKITVAKGR KTEITTTEEL TVTGDITVLS ASGTIKLSTA GGYISIDNAG DINIVGNHLM
LNGVRIDLNQ