Gene Pecwa_4184 details

Gene Information

• Locus tag: Pecwa_4184
• ID: 8532617
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 4611559
• End bp: 4612320
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 53%
• Product: ABC transporter related protein
• Protein accession: YP_003261515
• Protein GI: 261823409

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCAGTG TAAAGAATCT TTCTAAACGC TTTGGCGATC AGGTGGTGTT GAACAACATT 
AGTCTGGATA TCGCGAAAGG CGAAGTTGTT GCCATCATCG GCCCATCCGG TTCAGGTAAA 
TCCACGCTAC TGCGCTGCCT AAATCTGCTG GAAACGCCAG AGTCAGGCAC GATTGAAATT 
GGCGAGCAAA TGCTGGATAC GCATCGTTAT TCCTCCAAGG AGGCCTACGC GCTGCGCCGT 
CAAACGGCGA TGGTATTCCA GAGCTATAAC CTATTTAAGA ACAAGACGGC GCTGGAGAAT 
GTAACGGAAG CGCTGATTGT CGTGAAAAAA ATGCCGAAGA AGCAGGCGGA TGAAATCGGT 
CTGGCGTTGC TGGAACAGGT TGGCCTGCTG CCGCAGGCGG CTCAGTATCC GGTGACGTTA 
TCCGGCGGGC AGCAGCAGCG TGTGAGTATT GCTCGTGCGC TGGCGGTCGA TCCGAAAGCC 
ATTTTGTTTG ATGAACCGAC CTCGGCGCTG GATCCAGAAA GGGTACACGA AGTGCTTCAG 
GTGATTCAGA AGCTGGCGAA AAACGACACC ACGATGGTGA TCGTTACCCA TGAAATGCAG 
TTTGCCAAAG AAGTGGCTGA CCGCGTGATC TTCATGGCAG ACGGTCACAT CGTTGAGGAA 
GGCCCGGCGG AGCAGGTGAT CAGCTTCTCA GATAACCCGC AAACCCAGCG TTTCCTGCGT 
CAGTTGACCA AGCTGCCTGA GCCGCTTGAG TACGATATTT AA 

 

Protein sequence

MISVKNLSKR FGDQVVLNNI SLDIAKGEVV AIIGPSGSGK STLLRCLNLL ETPESGTIEI 
GEQMLDTHRY SSKEAYALRR QTAMVFQSYN LFKNKTALEN VTEALIVVKK MPKKQADEIG 
LALLEQVGLL PQAAQYPVTL SGGQQQRVSI ARALAVDPKA ILFDEPTSAL DPERVHEVLQ 
VIQKLAKNDT TMVIVTHEMQ FAKEVADRVI FMADGHIVEE GPAEQVISFS DNPQTQRFLR 
QLTKLPEPLE YDI