Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4077 |
Symbol | |
ID | 8532510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4486819 |
End bp | 4487970 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | periplasmic binding protein |
Protein accession | YP_003261412 |
Protein GI | 261823306 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAACTA GCTGGAAGCG GCAGCGTTGC CGTTCGTTAT TTTTGGGTAC GCTATTGATG GTATTTCTGT CACCGCTGTT AGGACAGGCT GCGCAAACCT CAACCGTCGT CAAGGATGTG TTGGGGCGCG AGGTGAGAGT CAACACGCCA GTGCAGCGCG TGATGCTGGG AGAGGGGCGT CAGCTTTATC TGGTTGCCAT GCTCGACAGA GAAGATCCGG CGAAAAGGAT TGTTGCCTGG CGGCGCGATC TGATTCAATC CGATCCGGCA ACGTGGCACC AGTATCGCGA TCGTTTTCCT CAACTGGCGA CGATCCCGAC GTTTGACGGC ACGGAAAAGG GCACGTTTGA CGTAGAGCAA GCGGTGTCGC TGAAGCCGGA TGTCATCATT ATGAATATTG AGGCACAGCG GGCGATTGTC GATGCGGGCT ATGACCGGAT ATTGGACAGC GTCGGGATTC CAATCGTCTA CGTTGATTTC CGCTATCACC CGCTGGAAAA CACCGCGCCG ACCATGCGCT TACTCGGCAC GCTGTTTAAT CAGGAAGCGC GTGCGGAAGC CTTTCTCGCA TTCCGTGAGG CGCAGCTAAA ACGCGTTTCC GACATATTGG CAGCGAAACA CCCGCGTTCT CCGCGCGTGT TCATTGAGCG ACTGGGTGGC TATACCGATG AGTGCTGCCT GACGTTTGGC CGGGATAACT TCGGTAAGTT CGTGCAGTTG GCTGGTGGCG ACAATGTGGC AGCGAAAAAC GCGCCGAATA CCTTTATGCA GATGCATCCT GAGCAGGTGA TTGTGGAAAA CCCCGAGATC GTGGTGATCA CCAGCGGCAA CTTTGAAGCC TTCGTGCCCG GCGGGCGCTG GATTGGGTTA GGACCGGGAC AGGATATAAC CGAAGGGCGC AAGCGGCTTA AATGGTTTCT GGGGCGTCCG GCTTATACCA ACAGCATTGC CAAACAGAAG CGTGCGTTCC ATGCTATCTG GCATCAGTTT TACAACGGCC CGTATGATTT CATCGCGATT CAGCAACTGG CAGAGTGGTT TCACCCAGAT TTATTCCGCG ATCTCAATGC GGATGACACT TTCCGCCAGC TTCATCAGCA GTTTTTACCA GTTGACTACC AGCCGGGCTA CTTCGTCAGT CTTGCGCCGT AA
|
Protein sequence | MLTSWKRQRC RSLFLGTLLM VFLSPLLGQA AQTSTVVKDV LGREVRVNTP VQRVMLGEGR QLYLVAMLDR EDPAKRIVAW RRDLIQSDPA TWHQYRDRFP QLATIPTFDG TEKGTFDVEQ AVSLKPDVII MNIEAQRAIV DAGYDRILDS VGIPIVYVDF RYHPLENTAP TMRLLGTLFN QEARAEAFLA FREAQLKRVS DILAAKHPRS PRVFIERLGG YTDECCLTFG RDNFGKFVQL AGGDNVAAKN APNTFMQMHP EQVIVENPEI VVITSGNFEA FVPGGRWIGL GPGQDITEGR KRLKWFLGRP AYTNSIAKQK RAFHAIWHQF YNGPYDFIAI QQLAEWFHPD LFRDLNADDT FRQLHQQFLP VDYQPGYFVS LAP
|
| |