| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4033 |
|---|
| Symbol | argD |
|---|
| ID | 8532466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 4437327 |
|---|
| End bp | 4438553 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
|---|
| Protein accession | YP_003261369 |
|---|
| Protein GI | 261823263 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.327701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAG AGCAGAAAGC AGTGACACGG GATACTCACG ATAAAGTGAT TTTGCCGGTT
TATGCACCCG CGAAGTTTGT ACCAGTGAAA GGTAAAGGGA GTCGCGTCTG GGATCAGGAT
GGTCGTGAAT ATATCGATTT CTCCGGTGGT ATCGCGGTCA CGGCGCTCGG TCACTGCCAT
CCGGCGCTGG TCAACGCATT GCAGCAGCAG GGCGAAAAAT TGTGGCATAC CAGCAATATT
TTCACTAATG AACCCGCACT ACGCCTCGCT AGCAAACTGA TCGATGCCAC GTTTGCCGAT
CGTGTGTTTT TTGTTAACTC CGGTGCAGAG GCTAACGAAG CGGCATTTAA GCTGGCACGT
CACTATGCGG TTAAACGCCA TAGTCCGTAT AAAACCAAGA TCATCGCCTT CTACAATGCA
TTCCATGGTC GCACGCTGTT CACCGTTTCA GTTGGCGGAC AACCTAAGTA TGCCGATGGT
TTCGGGCCTA AGCCTGCCGA TATTGTGCAC GTACCGTTCA ACGATCTGGC TGCGGTTAAA
GCAGTGATGG ACGATCACAC CTGCGCGGTT GTGCTGGAGC CAATTCAAGG TGAAGGCGGT
ATTACACCCG CTACGCCTGA GTTTTTGCAG GGCGTTCGTG AGTTGTGCGA TCAACATAAA
GCGCTGTTGG TGTTTGATGA AGTGCAGAGC GGGATGGGGC GTACCGGTAA ATTATTCAGC
TATATGCACT ATGGGATTAC GCCGGATATC CTGACAACCG CTAAAGCGTT GGGCGGTGGT
TTCCCTATTA GCGCGATGCT GACGACGGAA GAGATCGCAT CGGCTATGAC GGTTGGGGTA
CACGGAACGA CCTATGGCGG CAATCCGCTG GCCTGTGCGG TGGCAGAAGC CGCGCTGGAT
ATCATCAATA CGCCGGAAGT GCTGTCGGGC GTAGCAGATC GTCACGATCG CTTTGTTAGT
GAACTTGAGA AAATCAACCA GCAGTACGGT GTGTTTGATC AGGTACGTGG TATGGGGTTG
CTGTTGGGGG CCGAACTGAA ACCGCAGTGG CATGGCCGTG CGGGCGAATT TCTGGCTGCC
GCAACGGCAC AGGGGCTGAT GGTGTTGATG GCGGGTCCGA ACGTCATCCG TTTTGTACCG
TCTTTGATCA TTGATGAAGA TGATATTGCA CAGGGGATGG CGAAATTCGC CAACGCTGTT
GCGCAGGTCG TTAACGCAGG AAACTGA
|
|---|
| Protein sequence | MAAEQKAVTR DTHDKVILPV YAPAKFVPVK GKGSRVWDQD GREYIDFSGG IAVTALGHCH
PALVNALQQQ GEKLWHTSNI FTNEPALRLA SKLIDATFAD RVFFVNSGAE ANEAAFKLAR
HYAVKRHSPY KTKIIAFYNA FHGRTLFTVS VGGQPKYADG FGPKPADIVH VPFNDLAAVK
AVMDDHTCAV VLEPIQGEGG ITPATPEFLQ GVRELCDQHK ALLVFDEVQS GMGRTGKLFS
YMHYGITPDI LTTAKALGGG FPISAMLTTE EIASAMTVGV HGTTYGGNPL ACAVAEAALD
IINTPEVLSG VADRHDRFVS ELEKINQQYG VFDQVRGMGL LLGAELKPQW HGRAGEFLAA
ATAQGLMVLM AGPNVIRFVP SLIIDEDDIA QGMAKFANAV AQVVNAGN
|
|---|
| |