| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4020 |
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| Symbol | |
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| ID | 8532453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 4424017 |
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| End bp | 4425516 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | transcriptional regulator, GntR family with aminotransferase domain protein |
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| Protein accession | YP_003261356 |
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| Protein GI | 261823250 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.703474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTCAAAC ATGCCCAACT TGAATCTGTC AAAGCCTGGA TTGGCGATCC CGCACACGGC
ACATTGCCCC TGCATGCTCG TATCCAGCGG GCGATTCGCC AGCTCATCCT TGATGGCATT
CTCGACGTAG GGAAATCCTT GCCTGCATCG CGCGCGCTGG CTACATCACT GGGAGTATCG
CGTGATACGG TCGAATCGGC TTACAGCCAA CTACATGCAG AAGGGTTCAT TGAGCGTCGC
GTTGGCAGCG GCAGTTTCGT GTCCGAGCAG GCAAAACGCC TGTCAGGACG TGGCAAAGCT
CGGAAAGTCG GCACTAGCAA AACAGAGCTA CGTCTCAGCC AGCGCGGCAG CGCCATGTTC
CAGAATGGTG GGGTGCGCGA CTTCATCATA CCGCGCGCGT TTGCGCCCGG CGTACCGGAA
ACACGTACCT TTCCCCTCCA GACGTGGGAG CGACTGGAAC GGCAGGTGCT AAAAGAGCAT
GGCACACAGG CGCTGCTACA CAGCCCGCCG CAGGGTATGG AAGTGCTGAG ACGAGCCATC
TCAGATTACG TCAATCTCGA ACGCGGAGCC CGCGCCACAC CCGACCGCGT GTTAGTGTTG
ACCAGTTCCC AGCAAGCGCT AACCCTGTGC GCGAATGTGC TGATGGATGT TGGCGATAGG
ATCTTCCTTG AAGATCCTGT GTACCACGGT GCCCGTAAGG CATTCGAGGC TGCCGGGCTT
GCTTGTGTGC CGATACCATT AGATGCCAAT GGGTTGCAAG TCGATCGCCT GCTTGAAGCA
AGCGGCGAAC ACAATGCGTC CGCGAAAGCC GTGTTCCTGA CTCCCTCACA CCAGTTTCCT
ACCGGTGCGA CTCTGACGTT GGATCGAAGA CTCGCGGTTA TCGAATGGGC CTGGCAGCAC
CAGAACTGGA TTATTGAAGA CGACTACGAC AGCGAGTTTC ACTACGCGGG CAAACCTACC
GCCTGCGTGC AGGGACTCGA TCCGCACGAT CGCACGATCT ATATCGGCAC CTTCACCAAA
TCACTGTTCC CCGGCCTACG CATCGGCTAC ATGGTACTGC CGCCACAGTT GGTCGCACCG
ATGACCGTGG GCCGCACCTT GATGGATGGA CACAGCGCAC CGATCCCACA ACTCACGCTG
GCACGCTTCA TCGAAGGCGG CCACTTTGGT GCTCATGTAC GCACGATGCG CACCATTTAT
GCGGCACGTC GTGATGTGCT GGTACAACTG GTTCGTCAGC ATCTGGCTGA TTTCGTAGAA
CCACGGGTGC CGACAGGAGG CATGCAGATG CCCTGCATCT TCATCCGTGA TATTCCTGAA
CACGATGCGG TGGAATCCGC ACGTCGAGCC GGTATCGATC TACTGGGACT GACGGCGCTG
CATACGTCGG GTCAGCATAA AGCAGGTTTC CTTATGGGAT TTGCTGCCCA CGCTCCGCAT
GAACTGGAAA TTGCCGTCAA GACGCTGGCA AAGGTGCTAC GCGCACTGTG CCGCTCATAG
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| Protein sequence | MFKHAQLESV KAWIGDPAHG TLPLHARIQR AIRQLILDGI LDVGKSLPAS RALATSLGVS
RDTVESAYSQ LHAEGFIERR VGSGSFVSEQ AKRLSGRGKA RKVGTSKTEL RLSQRGSAMF
QNGGVRDFII PRAFAPGVPE TRTFPLQTWE RLERQVLKEH GTQALLHSPP QGMEVLRRAI
SDYVNLERGA RATPDRVLVL TSSQQALTLC ANVLMDVGDR IFLEDPVYHG ARKAFEAAGL
ACVPIPLDAN GLQVDRLLEA SGEHNASAKA VFLTPSHQFP TGATLTLDRR LAVIEWAWQH
QNWIIEDDYD SEFHYAGKPT ACVQGLDPHD RTIYIGTFTK SLFPGLRIGY MVLPPQLVAP
MTVGRTLMDG HSAPIPQLTL ARFIEGGHFG AHVRTMRTIY AARRDVLVQL VRQHLADFVE
PRVPTGGMQM PCIFIRDIPE HDAVESARRA GIDLLGLTAL HTSGQHKAGF LMGFAAHAPH
ELEIAVKTLA KVLRALCRS
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