Gene Pecwa_3989 details

Gene Information

• Locus tag: Pecwa_3989
• Symbol: rplE
• ID: 8532422
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 4404129
• End bp: 4404668
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 49%
• Product: 50S ribosomal protein L5
• Protein accession: YP_003261326
• Protein GI: 261823220

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0243679
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAAAC TGCATGATTA CTACAAAGAC GAAGTAGTTA AAAAACTCAT GACTGAGTTT 
AACTACAATT CTGTCATGCA AGTCCCTCGG GTCGAGAAGA TCACCCTGAA TATGGGTGTT 
GGTGAAGCGA TCGCTGACAA GAAACTGCTG GATAATGCAG CAGCAGATCT GGCAGCAATC 
TCCGGTCAAA AACCGTTGAT CACCAAAGCA CGCAAATCTG TTGCAGGCTT CAAAATCCGT 
CAGGGCTATC CGATCGGCTG TAAAGTAACT CTGCGTGGCG AACGCATGTG GGAGTTCCTT 
GAGCGACTGA TTTCCATTGC TGTACCGCGT ATCCGTGACT TCCGTGGCTT GTCCGCTAAG 
TCATTTGATG GTCGTGGTAA CTACAGCATG GGTGTGCGTG AGCAGATCAT CTTCCCGGAA 
ATCGACTACG ATAAAGTCGA TCGCGTTCGT GGTTTGGACA TTACCATTAC CACTACTGCG 
AAATCCGATG ATGAAGGCCG TGCGCTGTTG GCCGCCTTTA ACTTCCCATT CCGCAAGTAA 

 

Protein sequence

MAKLHDYYKD EVVKKLMTEF NYNSVMQVPR VEKITLNMGV GEAIADKKLL DNAAADLAAI 
SGQKPLITKA RKSVAGFKIR QGYPIGCKVT LRGERMWEFL ERLISIAVPR IRDFRGLSAK 
SFDGRGNYSM GVREQIIFPE IDYDKVDRVR GLDITITTTA KSDDEGRALL AAFNFPFRK