Gene Pecwa_3965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_3965 
Symbol 
ID8532398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand- 
Start bp4389336 
End bp4389893 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content46% 
IMG OID 
ProductDNA topoisomerase type IA zn finger domain protein 
Protein accessionYP_003261303 
Protein GI261823197 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0249698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAGT CCGTACTGTT TGCTGAAAAA AAACAGGAAA TATGTCCAGA CTGTGGGTCA 
GTACTGGTTA TCCGTTCTGG TCGGCACGGT CCATTTCTTG GCTGTTCTGC GTATCCAGAA 
TGCGAATTCA TTCGCCCACT GAAAGCGCAG GCTGATGGAC ATATCGTCAA AGTGTTGGAT 
GGGCAGCAAT GCCCGCTTTG TCAGTCGACA TTGGTGCTAC GGCAAGGCCG TTATGGGATG 
TTCATCGGTT GCGGCAATTA TCCTGAGTGC AATCATACTG AGATTATCGA TCGCCCTGAT 
GAAACGGCGA TTCGATGTCC ACAGTGTAAT GAAGGTACGC TGCTACAGCG TAAGTCTCGC 
TACGGCAAGG TGTTTCATTC TTGCGATCGT TATCCTGATT GCCAGTTTGT GTTAAACCAT 
AAACCGATAG CGGGTGAATG TCCTTCTTGC CATTATGCTT TATTGTTTGA GAAGAAGACG 
GCACAAGGCT CTAAGCTATT TTGTGCCAGT AAATTATGTG GAAAACCGAT AGCGACAGAA 
GTTGATAAGA ATGAGTGA
 
Protein sequence
MAKSVLFAEK KQEICPDCGS VLVIRSGRHG PFLGCSAYPE CEFIRPLKAQ ADGHIVKVLD 
GQQCPLCQST LVLRQGRYGM FIGCGNYPEC NHTEIIDRPD ETAIRCPQCN EGTLLQRKSR 
YGKVFHSCDR YPDCQFVLNH KPIAGECPSC HYALLFEKKT AQGSKLFCAS KLCGKPIATE 
VDKNE