| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3962 |
|---|
| Symbol | |
|---|
| ID | 8532395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 4387673 |
|---|
| End bp | 4387930 |
|---|
| Gene Length | 258 bp |
|---|
| Protein Length | 85 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1488 |
|---|
| Protein accession | YP_003261300 |
|---|
| Protein GI | 261823194 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0051868 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAAG CGATCCAGTT CCCAGATCGT GAAAATTGGG ATGATAAGGT AATGGCGATC
CGCTTTCCTG TTTTAGTAAA TGGCTTTCAG CAGGAATGTC TAGTGAGCGC AGAGCAGCTC
CAGCGACGTT ATGGCGGTGA TAGCCCCGAA CAGTGGCTGG CGCTGTTCAG GGAACATCGA
TGGGATCTTG AAGATGAATT GGAAAAAATG ATCCTTGCTG AAGAATGGAA TGATGAGGGC
TATTACTCAT TATCCTGA
|
|---|
| Protein sequence | MNQAIQFPDR ENWDDKVMAI RFPVLVNGFQ QECLVSAEQL QRRYGGDSPE QWLALFREHR
WDLEDELEKM ILAEEWNDEG YYSLS
|
|---|
| |