Gene Pecwa_3930 details

Gene Information

• Locus tag: Pecwa_3930
• ID: 8532356
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 4343019
• End bp: 4343810
• Gene Length: 792 bp
• Protein Length: 263 aa
• Translation table: 11
• GC content: 47%
• Product: hypothetical protein
• Protein accession: YP_003261268
• Protein GI: 261823162

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAGTC TAAATAACCT TGTTGGCACC ACGAATATTG ATGTTAGAGA CACAGCGAAA 
ACCAACTCGT CGGCGGCAAC CAGCGAGACA CCAAACAAAA CAGCATCGTC TGTACCATCA 
AATGAGTCAG CAACAAAAGA TAAAAGCAGC GTATCGTCAC TGGCGCGTCA GTTGAGTGAT 
GCCGCAGCAC GCGCAGAAGC AAGAGATGCC AGTCATAGCC GTAGCGAGCT GGCATCGTAT 
GCACAGTCTG TTATTGAGGA ACTCGCTGGC ATCAGTTACA TAAACAGCCA CAAAACACAT 
GCTGAAGAAT TACCCGCCAC TGACGATCCC GAATTGCTTG CACGAGCCAA ACAAGCTAAT 
GATTTCGCTA ATGGCCGCGG TACAAACCCC TTTAAAGGGC TATCTCGCGA TCAGCTCGCG 
CTCATTACTT ATGACGACAG CAATACTTTT ACCGTCAACG AGCGCAGGGC AGCATTACAT 
GAATCAAACG AACAGGAGAG CGCCTGGAGC CATTGGGTGG TAGCGAAAAG TAAACAAGAA 
TGGAATCAAG GGGAATTTAA ACAAACAGAA TTCTTCAAGC TCGTTCTGAA ACACTACGAG 
GACTTACCGC GAATCGAACA GGTACAGGCT CCCGCCAACT ACGAATCTCG GCTCAACCAT 
CTGATAGCAA TGGATTACAA CTTTGTAACC GGTGAATCAG GAAAAAATGC AAACCCGCTG 
AACAGTCTGT TCGATTTGCT TTTACCGCGT AATATCGAAC AAGGTGCTTT ACAAAAGCCA 
GAGTCAGATT AA 

 

Protein sequence

MISLNNLVGT TNIDVRDTAK TNSSAATSET PNKTASSVPS NESATKDKSS VSSLARQLSD 
AAARAEARDA SHSRSELASY AQSVIEELAG ISYINSHKTH AEELPATDDP ELLARAKQAN 
DFANGRGTNP FKGLSRDQLA LITYDDSNTF TVNERRAALH ESNEQESAWS HWVVAKSKQE 
WNQGEFKQTE FFKLVLKHYE DLPRIEQVQA PANYESRLNH LIAMDYNFVT GESGKNANPL 
NSLFDLLLPR NIEQGALQKP ESD