| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3878 |
|---|
| Symbol | |
|---|
| ID | 8532304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 4283709 |
|---|
| End bp | 4284602 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | chromosome replication initiation inhibitor protein |
|---|
| Protein accession | YP_003261217 |
|---|
| Protein GI | 261823111 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCC CGGACTATCG AACGCTTCAG GCTCTGGATG CCGTCATCCG CGAGCGTGGT
TTTGAACGCG CAGCCCAAAA GTTGTGTATT ACCCAATCTG CCGTTTCGCA ACGTATCAAA
CAGTTGGAAA ATCTGTTCGG CCAGCCTCTA TTGGTCAGAA CCATCCCACC CCGTCCGACA
GAGCAAGGTC AGAAACTGCT GGCTCTGCTT CATCAGGTAG AATTGCTGGA AGAAGAGTGG
CTAGGGAATG AAACCAACAG CGATATTCCG CTGTTACTCT CGCTGGCAGT GAACGCCGAC
AGCCTGGCAA CCTGGCTATT ACCAGCGTTA CAACCGGTGC TGGTCGATTC GCCAATTCGC
CTCAACTTGC AGGTAGAAGA TGAAACGCGT ACTCAGGAAA GGCTGCGCCG GGGTGAAGTG
GTGGGTGCAG TGAGTATTCA GTCTCAGCCG CTGCCAAGCT GTCTGGTGGA TAAGCTGGGC
GCACTGGATT ATCTATTTGT CGCATCGCCG GCTTTCGCCG CACGCTATTT CCCGAATGGC
GTGACGCGCT CGGCGCTGCT GCGCGCACCC GCCGTCGCCT TCGACCATCT GGATGATATG
CATCAGGCTT TTTTACAGCA AAACTTTGAT TTGTCGCCGG GCAGCGTTCC CTGCCATATC
GTGAATTCGT CGGAAGCCTT TGTTCAATTG GCGCGACAGG GCACGACCTG CTGCATGATC
CCACATCTGC AAATCGAGAG AGAACTTGCC CATAACGAGT TAATCGACCT GACACCGGGG
CTATTTCAAC GTCGGATGCT CTACTGGCAT CGCTTCGCAC CGGAAAGTCG GATGATGAGG
AAAGTGACGG ACGCCCTGCT CTCACACGGC CATCAGGTTT TGCGGCAGTC ATAA
|
|---|
| Protein sequence | MKRPDYRTLQ ALDAVIRERG FERAAQKLCI TQSAVSQRIK QLENLFGQPL LVRTIPPRPT
EQGQKLLALL HQVELLEEEW LGNETNSDIP LLLSLAVNAD SLATWLLPAL QPVLVDSPIR
LNLQVEDETR TQERLRRGEV VGAVSIQSQP LPSCLVDKLG ALDYLFVASP AFAARYFPNG
VTRSALLRAP AVAFDHLDDM HQAFLQQNFD LSPGSVPCHI VNSSEAFVQL ARQGTTCCMI
PHLQIERELA HNELIDLTPG LFQRRMLYWH RFAPESRMMR KVTDALLSHG HQVLRQS
|
|---|
| |