| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3870 |
|---|
| Symbol | |
|---|
| ID | 8532296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 4273449 |
|---|
| End bp | 4273796 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | Trp operon repressor |
|---|
| Protein accession | YP_003261210 |
|---|
| Protein GI | 261823104 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000129059 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCGT TATCGCTTAT CGATCCGACA CTTTCTGAAC AAGACAATGA GCATTGGTTA
CGCTTTGTCG CACTATTGCA GCAATCAATT GCGGAAGATC TCCAACTGCC ACTGCTGCAA
CTGCTGTTGA CGCCGGATGA GCGTACCGCG TTGGGAACGC GGGTGCGAAT TGTGCAAGAG
TTAATGCGGG GTGAAATGAG CCAGCGTGAG CTGAAAAGCG AGCTAGGAGC AGGAATTGCT
ACGATTACGC GCGGTTCAAA TAGTCTAAAA GCCGCGCCCC CCGCGTTAAA AAGCTGGCTG
GAAGCGCAGT TGCTATCGGC AAATAAACCG TTGGGTGACG ACGCGTAA
|
|---|
| Protein sequence | MTPLSLIDPT LSEQDNEHWL RFVALLQQSI AEDLQLPLLQ LLLTPDERTA LGTRVRIVQE
LMRGEMSQRE LKSELGAGIA TITRGSNSLK AAPPALKSWL EAQLLSANKP LGDDA
|
|---|
| |