Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3845 |
Symbol | lspA |
ID | 8532271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4245677 |
End bp | 4246189 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | lipoprotein signal peptidase |
Protein accession | YP_003261186 |
Protein GI | 261823080 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA TCTGTTCGAG CGGATTGCGC TGGCTCTGGC TGGCGATACT GGTTTTAGTG GTCGATCTTG GCAGCAAACA GTGGATCCTT GCCCACTTTG CGCTGGGAGA TACGGTGCCA ATTATGCCTT CTCTGAACCT GCATTACGCC CGTAACTATG GCGCAGCATT CAGCTTCCTG GCGGATAAAG GCGGCTGGCA ACGCTGGTTC TTTGCTGGGA TTGCGATTGC GATTGTGGTT GCTCTCGTGG TGATGATGTA CCGTGGCAGC GTCAAGCAGA AGCTAAATAA CATTGCCTAT TCGCTGATTA TCGGCGGTGC ACTGGGTAAT CTGTTTGACC GGACATGGCA CGGCTTTGTC GTTGATTTCA TCGACTTCTA TGTTGGTGAT TGGCACTTCG CTACGTTTAA TTTAGCCGAT ACCGCGATCT GTATTGGTGC GGCGCTCATT GTGCTGGAAG GGTTTTTCAG TACGCATGAT GATACTGATA CCGTTAAGCA AAAGGGTCAC TGA
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Protein sequence | MNKICSSGLR WLWLAILVLV VDLGSKQWIL AHFALGDTVP IMPSLNLHYA RNYGAAFSFL ADKGGWQRWF FAGIAIAIVV ALVVMMYRGS VKQKLNNIAY SLIIGGALGN LFDRTWHGFV VDFIDFYVGD WHFATFNLAD TAICIGAALI VLEGFFSTHD DTDTVKQKGH
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