| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3838 |
|---|
| Symbol | |
|---|
| ID | 8532264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 4236586 |
|---|
| End bp | 4237425 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1212 |
|---|
| Protein accession | YP_003261179 |
|---|
| Protein GI | 261823073 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAGTG AACGTGAGAA CCGTGAACTA TTAAGTAGTG AAAAACAATT ATGTAGCGAA
AAACGGATGA GTGAAGCGCC ACAGCAGCGG GAAATAACCC GATTGTGCAT CCAGTGCGCA
CTGCTGCTAT TGCAGCATGG TGCAGAAAGT ATGGTCGTGG AGCAACTGTC TTCAAGGTTG
GGTATGGCAC TGGGGGCCGA TAGCGTTGAG AGTTCAATCT CGGCAAATTC GATTGTCCTG
ACCACCATCA TGCAAGGGCA TTGCCTGACG TCAACGCGGA AGAATGTGGA TCGCGGCATT
AACATGCACG TTGTTATTGA GGTGCAGCAT GCGGTGATCA TGGCTGAGCA TAAACTGCTG
GATGTGGCGG GCGTGGAGAA GCGTCTGGGA AATATTAAGC CACTGCGCTA CCCGCGTTGG
CTGATGGTTT CCGTCGTGGC GCTCTCCTGC GGCTGCTTCA GCCGTTTGAA CGGCGGCGGG
TGGGATGCGT TTATTGTCAC GCTGATTGCC AGCGGTCTGG CGATGTATGT CCGTCAGATC
TTTACGGCAC GACATCTGAA TCCGCTAATC AATTTCTGTA TTACGGCGTT TGTCGCCACG
TCGGCGTCAG GGTTGCTGAT GCGCTTGCCA GCTTTTTCTC AGACCTCGAC GGTGGCGATG
GCGGCGAGTG TGCTGCTGTT GGTTCCCGGC TTTCCCTTGA TCAACGCCGT GGCGGATATG
TTTAAAGGGC ATGTAAATAC CGGTCTGGCA CGCTGGACGG TGGCGAGTTT ATTGACGCTG
GCAACCTGTA TTGGTGTGGT GATGGCAATG TCGCTGTGGG GGTTACGCGG ATGGGCTTAA
|
|---|
| Protein sequence | MVSERENREL LSSEKQLCSE KRMSEAPQQR EITRLCIQCA LLLLQHGAES MVVEQLSSRL
GMALGADSVE SSISANSIVL TTIMQGHCLT STRKNVDRGI NMHVVIEVQH AVIMAEHKLL
DVAGVEKRLG NIKPLRYPRW LMVSVVALSC GCFSRLNGGG WDAFIVTLIA SGLAMYVRQI
FTARHLNPLI NFCITAFVAT SASGLLMRLP AFSQTSTVAM AASVLLLVPG FPLINAVADM
FKGHVNTGLA RWTVASLLTL ATCIGVVMAM SLWGLRGWA
|
|---|
| |