Gene Pecwa_3815 details

Gene Information

• Locus tag: Pecwa_3815
• ID: 8532241
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 4212360
• End bp: 4213130
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 55%
• Product: SNARE associated Golgi protein-related protein
• Protein accession: YP_003261156
• Protein GI: 261823050

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGCGT GGCTGGATCA TCTGGTTACC CAATCACTCG CGTATTCGCT GATCGCCGTC 
ATGCTGGTTG CCTTTCTGGA ATCTCTGGCT CTGGTGGGCC TGCTGTTGCC GGGCACGGTG 
ATGATGGCAA CGCTGGGGGC GCTGATCGGT AGCGGACAAA TGGGGCTGTA TTCTGCGTGG 
GCGGCTGGAA TTATCGGCTG CCTGCTAGGG GATTGGATTT CCTATTTTAT TGGCGTGCGT 
TTCAAAGCGC CGCTGCATAA CTGGTCTTTC CTGAAAAAGT ATCAGACATT AGTAAATAAA 
ACCGAATATG CTCTGTATCA ACACCCAATG CCGACGATAT TGATCGGGCG CTTTGTCGGC 
CCGACGCGGC CGTTAATCCC GATGGTAGCG GGAATGCTGG GGTTGCCTCC GTATAAATTT 
GCCGTGCCGA ATATCATCGG CTGCCTGCTG TGGCCACCAG CCTATTTCTT ACCCGGCATT 
TTGGCTGGGG TGGCAATTGA TATTCCCGCA GACACGAACA GCGCGGGTTT TAAGTGGTTA 
TTATTGGTAA CGGCCGTCGC CGTGTGGGTC GCAGGCTGGT TAAACTGGCG CTGGTGGCGC 
AGTGATAAGC GTAAACATCC TGATTGGTTT AGCAGAATGA TGCCGCTCAG ACGCCTGCGT 
TGGGCGGTTC CGGCGATATC TGTGGCGGCG GTTGCATCGT TGATCGCGCT GATTCAGCAC 
CCGCTGATGC CAGTTTACCG GCACCTGCTA TGGCAGGTGC TCAACGGGTA G 

 

Protein sequence

MEAWLDHLVT QSLAYSLIAV MLVAFLESLA LVGLLLPGTV MMATLGALIG SGQMGLYSAW 
AAGIIGCLLG DWISYFIGVR FKAPLHNWSF LKKYQTLVNK TEYALYQHPM PTILIGRFVG 
PTRPLIPMVA GMLGLPPYKF AVPNIIGCLL WPPAYFLPGI LAGVAIDIPA DTNSAGFKWL 
LLVTAVAVWV AGWLNWRWWR SDKRKHPDWF SRMMPLRRLR WAVPAISVAA VASLIALIQH 
PLMPVYRHLL WQVLNG