Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3797 |
Symbol | |
ID | 8532223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 4193343 |
End bp | 4194743 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_003261139 |
Protein GI | 261823033 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTAAGA CGTTATATCA AAAATTGTAC GACGCGCACA TCGTGCATGA AGCGCCGAAC GAAACACCGC TGCTGTATAT CGACAGGCAT CTGGTGCATG AAGTGACTTC CCCACAGGCA TTCGACGGCC TGCGTGCGAT GGGCCGCAAG GTTCGTCAAC CAGGGAAAAC CTTCGCGACC ATGGACCACA ACGTCTCCAC GCAGACCAAA GACATCAACG CCAGCGGTGA GATGGCCCGC ATTCAGATGC AGGAGTTAAT CAAGAACTGT GCGGAATTCG GCGTTCAGTT GTATGACCTT AACCACCCGA ATCAGGGCAT CGTTCACGTT ATCGGCCCAG AACAAGGGAT GACGCTGCCG GGCATGACCA TCGTCTGCGG TGACTCACAC ACCGCAACGC ACGGCGCGTT TGGTTCACTG GCCTTCGGCA TCGGTACATC GGAAGTCGAA CATGTGCTGG CGACGCAAAC CCTGAAACAG GGTCGTGCCA AAACCATGAA GATTGAAGTC ACGGGTGATG CGGCACACGG CATCACCGCA AAAGACATCG TGCTGGCGAT CATCGGTAAA ACAGGTAGCG CGGGCGGCAC CGGCCATGTC GTTGAATTTT GTGGCAAAGC CATTCGTGCG CTGAGCATGG AAGGCCGTAT GACACTGTGC AACATGGCTA TTGAGATGGG TGCGAAGGCG GGTCTGGTTG CACCGGATGA AACCACCTTC AACTACCTGA AAGGCCGCCA GTTTGCTCCG AAAGACGCCA ACTGGGACGC CGCCGTTGCC TACTGGAGCA CGCTGGAATC CGATGATGAC GCGCAGTTTG ACACTATCGT CACGCTGGAC GCCGCGCAGA TTGCACCGCA GGTCACCTGG GGCACCAACC CCGGTCAGGT TATCGCCGTC AATCAGGAAA TCCCTAACCC TGATTCTTTC AGCGATCCGG TAGAGCGCGC CTCTGCCGCC AAAGCACTGG CGTATATGGA TCTGCAACCC GGCATTAAAC TGACTGACGT GAAGATCGAT AAAGTCTTCA TTGGTTCCTG TACCAACTCG CGCATCGAAG ATTTGCGCGC AGCGGCAGAG ATTGCCAAAG GGCGTAAAGT CGCCGCTGGC GTTCAGGCCA TCGTCGTACC CGGCTCCGGC CCGGTAAAAA CCATGGCAGA GCTGGAAGGG CTGGATAAAG TGTTCATCGA AGCGGGTTTT GAGTGGCGCT TACCGGGCTG CTCCATGTGC CTGGCGATGA ACAATGACCG CCTGAACCCT GGCGAACGTT GTGCATCAAC CAGTAACCGT AACTTTGAAG GCCGTCAGGG GCGCGCTGGC CGCACCCATT TGGTCAGCCC GGCAATGGCT GCGGCTGCGG CGGTGACGGG TCGCTTTGCC GACGTCCGCG AGTTGAATTA A
|
Protein sequence | MGKTLYQKLY DAHIVHEAPN ETPLLYIDRH LVHEVTSPQA FDGLRAMGRK VRQPGKTFAT MDHNVSTQTK DINASGEMAR IQMQELIKNC AEFGVQLYDL NHPNQGIVHV IGPEQGMTLP GMTIVCGDSH TATHGAFGSL AFGIGTSEVE HVLATQTLKQ GRAKTMKIEV TGDAAHGITA KDIVLAIIGK TGSAGGTGHV VEFCGKAIRA LSMEGRMTLC NMAIEMGAKA GLVAPDETTF NYLKGRQFAP KDANWDAAVA YWSTLESDDD AQFDTIVTLD AAQIAPQVTW GTNPGQVIAV NQEIPNPDSF SDPVERASAA KALAYMDLQP GIKLTDVKID KVFIGSCTNS RIEDLRAAAE IAKGRKVAAG VQAIVVPGSG PVKTMAELEG LDKVFIEAGF EWRLPGCSMC LAMNNDRLNP GERCASTSNR NFEGRQGRAG RTHLVSPAMA AAAAVTGRFA DVRELN
|
| |