Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3784 |
Symbol | murF |
ID | 8532210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4176805 |
End bp | 4178166 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
Protein accession | YP_003261126 |
Protein GI | 261823020 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCGCG TTTCTTTGCA GCAACTTGCC ACGGTGCTTA ATGCGCAGTT GATTGGTGAA AACATTGATA TTGAAGATGT TTCAACCGAT ACGCGTAAGC TGTCGTCCGG CTGTTTGTTT GTCGCGCTGA AAGGCGAGAA ATTCGATGCG CATGATTACG CCGCTGATGC AGTAAAAGGC GGTGCGGCGG CTCTGTTAGT CAGTAAGCGC TTACATATCG ATGTGCCACA ATTGCTGGTG AGCGATACGC GTTTAGCGTT AGGGCAATTG GGTGCCTGGG TTCGCCAGCA GTCAACGGCG CGCGTTGTTG CACTGACAGG TTCTTCCGGC AAAACCTCGG TTAAAGAGAT GACGGCGGCG ATCCTGCGCC AGTGCGGCTC GGTGCTGTAT ACCGCTGGTA ACTTCAACAA CGATATTGGT GTGCCGTTAA CGCTGCTGCG TCTGACAGCA GAACATCAGT TTGCGGTGAT TGAACTAGGG GCGAATCACA TTGGTGAGAT TGCCTATACC ACCGATCTGG TGCGGCCGGA AAGCGCGCTA GTCAACAATC TGGCCGCTGC ACATCTGGAA GGTTTTGGTT CACTGGCTGG TGTGGCGCAG GCGAAAGGTG AGATTTTTTC TGGTTTGCCA GTAGACGGCG TAGCGATCGT GAATGCAGAC AGTAACGATT TCCCGCACTG GCAGGTCACG CTGAATCATA AAACCGTCTG GCGTTTCTCG CCGCAGGCCG CTTGCAACAT CGATTTTTTT GCCAGCGACG TAGCCGTTTT AGCACAGAGT ACGCGTTTCA CTCTGCATAC ACCGTTTGGC GACACGCAGG TTTTGCTGCC TTTACCCGGT CGACATAATG TGTCGAACGC GTTGGCGGCA ACGGCGTTGG CGATGTCCGT CGGGGCGACG CTGGAAGCCG TTAAAGCAGG ATTATCTCAG CTTCAAGCGG TGCCGGGACG ATTGTTTCCG ATCGCGCTGT CTGAAGGCAA GCTACTGCTG GATGACAGTT ATAACGCCAA CGTGGGCTCG ATGACGGCCG CGGCACAGGT ATTGGCAGAT ATGCCGGGTT ACCGCGTGAT GGTTGTCGGC GATATGGGGG AGCTGGGTGA TGATGCTCCT GAGTGTCACC GTCAGGTGGG CGAAGCGGCG CGTGTTGCGG GCATCGATTG CGTATTGAGT GTAGGAACGT TGAGTAAATT GATAAGCCAA AGCAACGGCA ATGGCGAGCA TTTTCACGAT AAGGCCGCGC TAATTTCACG TTTGAAGGTG CTGATGTCAG AACATAACGT CATCAGCGTA TTGGTCAAAG GCTCTCGCAG CGCTGCGATG GAGCAGGTTG TACACGCATT ACAGGAGAAT GCTCAATGTT AG
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Protein sequence | MIRVSLQQLA TVLNAQLIGE NIDIEDVSTD TRKLSSGCLF VALKGEKFDA HDYAADAVKG GAAALLVSKR LHIDVPQLLV SDTRLALGQL GAWVRQQSTA RVVALTGSSG KTSVKEMTAA ILRQCGSVLY TAGNFNNDIG VPLTLLRLTA EHQFAVIELG ANHIGEIAYT TDLVRPESAL VNNLAAAHLE GFGSLAGVAQ AKGEIFSGLP VDGVAIVNAD SNDFPHWQVT LNHKTVWRFS PQAACNIDFF ASDVAVLAQS TRFTLHTPFG DTQVLLPLPG RHNVSNALAA TALAMSVGAT LEAVKAGLSQ LQAVPGRLFP IALSEGKLLL DDSYNANVGS MTAAAQVLAD MPGYRVMVVG DMGELGDDAP ECHRQVGEAA RVAGIDCVLS VGTLSKLISQ SNGNGEHFHD KAALISRLKV LMSEHNVISV LVKGSRSAAM EQVVHALQEN AQC
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