| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3773 |
|---|
| Symbol | |
|---|
| ID | 8532199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 4164749 |
|---|
| End bp | 4165276 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF721 |
|---|
| Protein accession | YP_003261115 |
|---|
| Protein GI | 261823009 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000368452 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGATA GCCGCCCACA ATCACTGGAA TTTCTGTTTG ATAGCGCATC TATGTCGGGT
AAAGGCCCGC TACAAGATGT GCAACAGCGC GCTATCGCCT TATTAAAACT CAACCGTGCC
GTCCGCGGAT TGCTGCCAGC ACCGTTGCAC CCATGGTGCC GCGTCGCTAA TTACCGACAA
GGCTTACTAA TACTGGAAAC CGCCAACGCC AGTTGGCTGA TGCGGTTACG TTACGAACAA
CCTGCGCTGC TCTCTGCATT ACGCGCACAA ATACTACCAT CATTGGCTTC AATCGACATC
AGGATTAATC CAACGCTTGC CGCAAAAGGG CATGAAACCG TGAAAAATAG TGACATTTCA
GTAACGGGGA GTGCCGACGA CAAACCGTTG CGTCAGTTGA GTGAGCAAAG CGCGGAGACA
TTGAGGACGT TAGCAGGCAA CAGCCCGGAA AAACTTAGAA AGATATTAGA ACGACTGGCA
TCACTGGCCG GAGAGGGTAC CAGTAAAACC AGTCGTAATA AGAAGTGA
|
|---|
| Protein sequence | MRDSRPQSLE FLFDSASMSG KGPLQDVQQR AIALLKLNRA VRGLLPAPLH PWCRVANYRQ
GLLILETANA SWLMRLRYEQ PALLSALRAQ ILPSLASIDI RINPTLAAKG HETVKNSDIS
VTGSADDKPL RQLSEQSAET LRTLAGNSPE KLRKILERLA SLAGEGTSKT SRNKK
|
|---|
| |