| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3707 |
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| Symbol | |
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| ID | 8532133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 4081684 |
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| End bp | 4083003 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_003261049 |
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| Protein GI | 261822943 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000100596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAAT CAGCAGAGTT GGTCGTCGTT GTCGCTGATG ATTTTACGGG TGCCAATGAT
GCGGGCGTCG GACTGGCGCA GCATGGTGCG CGGGTTAGCG TCGTATTTGA CGTTAATAAA
CTGCATGCGG ATTTACTGGG TGATGCGGTA GTCATCAACA CCGATAGCCG GGCGGCGCAT
AGCGATGTGG CGTCTCAACG TACCGCAGAC GCGGTAGCCG CCTGGCAGGC AGCGGGCGGG
CAAGGCTGGA TTATTAAGAA GATTGACTCG ACGTTACGCG GGAATCTGGG CGCGGAAGTT
GCCGCGGCGC TGTCTGCGGC AGAGGTGCCT GTTGCACTGA TTGCTGCGGC ATCGCCGACG
CTGGGACGTA TTACCCGAAA AGGTGAAGTC TGGGTTAATG GTCGTTTGCT TACCGATACC
GAATTTGCCA GCGATCCGAA AACCCCGGTG GCCTCGGCTT CTATTGCCGC TCGTCTGGCG
GAACAGACCG CGTTGCCAGT GGCAGAAGTC CATCTTGATG AGGTTCGTCA GACTAATTTA
GCCCTGCGTT TGCAGCAGTT GGCTGACGAG GGGGCGCGTC TGATTATTCT TGATACGGAC
GTGCAAGACG ACCTGGCGCA TATTGTTGAT GCCGCCAAGG CGCTGCCGTT TCGTCCCTTG
TTGGTCGGCT CGGCAGGCCT GAGCGAAGCG CTGGCCAATG CGCTGGATTT TACACACAAA
GCCGAGAAAC CGCTGCTGGC CGTCGTGGGA TCAATGAGTG ATATTGCTCA AAAACAGATT
GCAATCGCTC GCCAGCACCG CGATGTCACG CTGGTTGAGA TCGACATCAG CGCGCTCTTT
TCATCCCATT CATCCACCGT CATGGCGTCC CAGTGTCAGG ACGCGGTGAG CGCACTGATG
AACGGCCAAC ACTGCATTAT TCGTACCTGT CACAACGAGA ACCAGCGCTT CGAGATCGAC
GCGCGGTGTC AGCAACTTGG GCTTACCCGC CAGCAGCTTG GCGAAACGAT CAGCCATTAT
CTAGGGGAAC TTACGCGCAG CATTGTTCAG GCTCTAGATA GCCTGGCAGC AGACGACACT
AGCCGACGCT TGCCGGGGGG ACTGTATTTA TCGGGTGGTG ATATTGCGAT TGCCGTGGCA
ACCGCACTGG GCGCGACCGG TTTTCAGATT AAGGGGCAAA TCGCATCCTG TGTGCCTTGG
GGATACCTGC TGAACAGCGT TGTCGGCATG ACCCCTGTGA TGACTAAAGC GGGGGGTTTT
GGCAACGAAA CTACTTTGCT CGACGTTTTA CGTTTTATTG AGGAGAAGGT CAGTGAGTAA
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| Protein sequence | MQQSAELVVV VADDFTGAND AGVGLAQHGA RVSVVFDVNK LHADLLGDAV VINTDSRAAH
SDVASQRTAD AVAAWQAAGG QGWIIKKIDS TLRGNLGAEV AAALSAAEVP VALIAAASPT
LGRITRKGEV WVNGRLLTDT EFASDPKTPV ASASIAARLA EQTALPVAEV HLDEVRQTNL
ALRLQQLADE GARLIILDTD VQDDLAHIVD AAKALPFRPL LVGSAGLSEA LANALDFTHK
AEKPLLAVVG SMSDIAQKQI AIARQHRDVT LVEIDISALF SSHSSTVMAS QCQDAVSALM
NGQHCIIRTC HNENQRFEID ARCQQLGLTR QQLGETISHY LGELTRSIVQ ALDSLAADDT
SRRLPGGLYL SGGDIAIAVA TALGATGFQI KGQIASCVPW GYLLNSVVGM TPVMTKAGGF
GNETTLLDVL RFIEEKVSE
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