| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3628 |
|---|
| Symbol | |
|---|
| ID | 8532054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 3999005 |
|---|
| End bp | 3999886 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_003260971 |
|---|
| Protein GI | 261822865 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAAT CTATCGCTTT TACCGTATCG TTACTCGCTG CATCGTTGGG TCTGGCTTCT
ACTGCTAACG CCGCTGAGCT AAAAATCGAC GTGTTTAATC CAGGTGAAGC GAGTGTATTC
CCAGTCTCCT CCGAGATTAT CAGCGGCGAT AAAGAAGTTG CTCTGATTGA TGCCCAGTTC
CAGCGTAACG ATGCTCAAAC GCTGGTTGAG CGCATTAAAG CCTCCGGCAA AAAACTGACC
ACCGTCTATA TCAGCCATTC CGACCCTGAC TACTACTTCG GTCTGGATGT GATTAAAGCC
GCGTTCCCAG ACGCTAAAAT CATTGCGACC CAAGCCACTA TCGATGCCAT CAACGCGAGC
AAAGACGGCA AAGTGGCACA CTGGGGCCCG GTTCTGAAAG AAAACGCACC GAAAGAGATC
GTTGTTCCTC AACTATTGGC AGGCGATAGC TTTACCGTTG ATGGTAAAAA ACTGGAAGTG
AAAGGACTGA AAGGGCCAAC GCCGGATCGC ACTTACGTCT GGATTCCTTC GCTGAAAGCC
GTTGTTGGCG GTATTCCAGT GTCTGCCAAC ATCCACGTCT GGCTTGCCGA TACCCAAACA
CCGGAATCTC GCGTTCACTG GCGTGAAACA TTGAAATCCA TTGAAGCACT GAAGCCGACC
ACCGTGGTGC CGGGTCATTT CATGGCGCCA ACAGATTACA CCGTGAAGAA CGTGACGTTC
ACACTGCAAT ATCTGGAGAC GGTGGAAAAA GAGCTGGCGA AGAGCAAAGA TTCTGCCGAG
CTGGTCGCCG CAATGAAAAA ACACTACCCA ACACTGAAAG AAGAATCGAG TCTTGAACTG
GGTGCTAAGG TCCTGAAAGG TGAGATGAAG TGGCCACAGT AA
|
|---|
| Protein sequence | MSKSIAFTVS LLAASLGLAS TANAAELKID VFNPGEASVF PVSSEIISGD KEVALIDAQF
QRNDAQTLVE RIKASGKKLT TVYISHSDPD YYFGLDVIKA AFPDAKIIAT QATIDAINAS
KDGKVAHWGP VLKENAPKEI VVPQLLAGDS FTVDGKKLEV KGLKGPTPDR TYVWIPSLKA
VVGGIPVSAN IHVWLADTQT PESRVHWRET LKSIEALKPT TVVPGHFMAP TDYTVKNVTF
TLQYLETVEK ELAKSKDSAE LVAAMKKHYP TLKEESSLEL GAKVLKGEMK WPQ
|
|---|
| |