Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3627 |
Symbol | |
ID | 8532053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 3997980 |
End bp | 3998897 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003260970 |
Protein GI | 261822864 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCGCA TTACGGCTGC TGAAGTGTTT GTCACTATTA TAGATCGCGG CAGCATGATC GCAGCGGCAG AGACGCTGGA TATGTCCCGG GCAATGGTAA CGCGCTATCT GGCAGAGATG GAGACGTGGG CAGGCGCGCG GTTATTGCAT CGCACTACGC GTAAGTTGAG CCTGACTGAT GCGGGGGAAA AAACGCTGGT GCGTTGTCGG GAGATGCTAG CGTTGACGGC TGACATGCGC GTTGAGGCTG ATACTGGCAA TGCTATGTTA AGCGGCTTGC TGCGACTCAG TTGTTCGCAG TCGCTGGCGC AGGGGGCGAT CGGCATGGCG ATCACCACTT TCTTGCGGCA CCATCCTCGG GTCGCTATCG ATCTGCAAAT GAATAACCGG TCAGTGAATC TGGTTGAGGA GCGTATCGAT CTGGCGTTGC GTATTACCAA CGAACTTGAT CCCAATTTGA TCGCGCGCCC GCTGGCAAGC TGTGAGTCGG TATTGTGTGC GTCACCGTCT TATCTGAATG AGCATGGTAT TCCGCGGCAG CTTACCGATC TTTCGGTGCA TAATTGCCTG ACCTATACCT ATTTTGGCAA AAGCCTGTGG CATTTTTCCC GCGATGATGA AAAGTTTACG ATTCCCGTCA GTGGAAACCT GAGCGGTAAT GAATCGCTCG TGCTGCTGTC AGGCGCGCTG GAAGGGGCGG GGATTGCGCT GCAACCGCGC TATTCCGTGA CGCCTTATCT CGCTAGCGGG CAGTTGGTCG CGCTGTTGCC AGAATATCGC CCGCAGGCGA TGGGCATTTA CGGTATTTAC ACCTCGCGCC GTCAGATGCC CGCTGCGCTG CGAACGCTGT TAGATTTTCT GGTGGACTGG TTTGCTCACG ATCCGCGCTG GCGGACGCTG ACCCAGAAAG CGGTGTAA
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Protein sequence | MDRITAAEVF VTIIDRGSMI AAAETLDMSR AMVTRYLAEM ETWAGARLLH RTTRKLSLTD AGEKTLVRCR EMLALTADMR VEADTGNAML SGLLRLSCSQ SLAQGAIGMA ITTFLRHHPR VAIDLQMNNR SVNLVEERID LALRITNELD PNLIARPLAS CESVLCASPS YLNEHGIPRQ LTDLSVHNCL TYTYFGKSLW HFSRDDEKFT IPVSGNLSGN ESLVLLSGAL EGAGIALQPR YSVTPYLASG QLVALLPEYR PQAMGIYGIY TSRRQMPAAL RTLLDFLVDW FAHDPRWRTL TQKAV
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