Gene Pecwa_3587 details

Gene Information

• Locus tag: Pecwa_3587
• ID: 8532013
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 3956455
• End bp: 3957168
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 56%
• Product: Opacity-associated protein A
• Protein accession: YP_003260930
• Protein GI: 261822824

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000352842
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCAGAA TTGCGCCCAG GAAGCGGAAA AACACCTGGG ATTATCAAAC GCTAGTACGC 
TTCTGCCGGC GAATCATCCA GCGGCAGCCC TCAGATGCTG TAGCCGTAGA GAACGATGAG 
GCTAATGAAG AGCAGACTCG TCTGTCCCCC CCTTCCCTGC GCGAGCGTAT GGGTGCCACA 
CTGCAAAAAA TCTGGCATCT GCCCGACAGT TACCACTGGA TGGAGCCATT GCCGCTCCTC 
CATCGTCGCT GGATTTTAAT CGCTATTGCC CTATTGCTGA TGGTATTGCT CTGGCCTTAC 
AGCCCACAAC ACCCACAGCC TCTCCATTCT ACGCCCGTTC CTCTGACTCA GGCGGATAAT 
CAGGCTGCGA TGCAGGCCGT AATTATTGAA AACCCGCCTT CCACGTCACA GCAACAGCAT 
GCGACGACAC CGCCGCCGGA TCAGCAGTCA GCGCCGTGGC GGAATTATGA AATATCATCA 
GGGCAAACGC TGGCCCAGCT CTTTCGCGAT AACAATTTGC CCGTCAGCGA TGTGTTCGCT 
ATGGCGCAGG TGGAAGGCCG GGATAAGCCG CTCAGCAATT TACGGGCAGG TCAGGCAGTA 
AAATTACAGT TGAATGCACA AGGCATGGTG GCAGAGCTGG AAATCGAAAC CACAGCGAAC 
CAGACGATTC GGTTCACGCG TGGTGCGGAC GGCGCATTCA CCCGCACACG CTAG 

 

Protein sequence

MGRIAPRKRK NTWDYQTLVR FCRRIIQRQP SDAVAVENDE ANEEQTRLSP PSLRERMGAT 
LQKIWHLPDS YHWMEPLPLL HRRWILIAIA LLLMVLLWPY SPQHPQPLHS TPVPLTQADN 
QAAMQAVIIE NPPSTSQQQH ATTPPPDQQS APWRNYEISS GQTLAQLFRD NNLPVSDVFA 
MAQVEGRDKP LSNLRAGQAV KLQLNAQGMV AELEIETTAN QTIRFTRGAD GAFTRTR