| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3584 |
|---|
| Symbol | |
|---|
| ID | 8532010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 3954819 |
|---|
| End bp | 3955484 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | iron-sulfur cluster repair di-iron protein |
|---|
| Protein accession | YP_003260927 |
|---|
| Protein GI | 261822821 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000456078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATATC GCGATCAATC CTTGGGTGAG CTGGCTATCG CTATTCCGCG CGCTACCAAA
CTCTTTCGTG AACTCAATCT GGACTTCTGC TGCGGCGGAA AACAAACGCT AAGCCGCGCG
GCTGGCAAAA AAGATCTCAA TATCGATGAG CTAGAAGCTC AGTTAAATGA GCTGGCCGCA
CAGCCTTCTG ATGCACGAGA CTGGCGTGAA GCCCCGCTGG CTGACATTAT CGCGTACATC
ATTCCTCGCT TTCATGACCG CCACCGTGAA CAACTGCCTG AGCTGATTTT GATGGCAGAA
AAAGTCGAAC GCGTGCATCA CGATAAAGCG GACTGCCCAC ACGGCCTCGC CGCACAGTTG
ACCGCCATCT ATAACGAGCT GTCTCAACAT ATGATGAAAG AAGAGCGCAT CCTATTCCCG
ATGATCGGTC AGGGAATGGG GGCAAATGCT GCTGCACCGA TTTCAGTGAT GGAGCATGAG
CATGATGACG CCGGGCGTGA CGTGGAAGTG GTAAAAGAGC TAACCAACGG CGTCGTACCG
CCGGAAGGTG CCTGCAACAC CTGGCGTGCC CTGTACTCTG GTATTAACGA GTTTATTACC
GATCTAATGG AACACATCCA TCTGGAAAAT AATTTGCTGT TCCCACGCGC ACTGCGCGGT
GAGTAA
|
|---|
| Protein sequence | MAYRDQSLGE LAIAIPRATK LFRELNLDFC CGGKQTLSRA AGKKDLNIDE LEAQLNELAA
QPSDARDWRE APLADIIAYI IPRFHDRHRE QLPELILMAE KVERVHHDKA DCPHGLAAQL
TAIYNELSQH MMKEERILFP MIGQGMGANA AAPISVMEHE HDDAGRDVEV VKELTNGVVP
PEGACNTWRA LYSGINEFIT DLMEHIHLEN NLLFPRALRG E
|
|---|
| |