| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3549 |
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| Symbol | rumA |
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| ID | 8531975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 3907350 |
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| End bp | 3908699 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | 23S rRNA 5-methyluridine methyltransferase |
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| Protein accession | YP_003260892 |
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| Protein GI | 261822786 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.029326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCAAT TCTACTCTCC AAACCGGCGT GTGACGACCC GGAAAGCAGT TCCAGCGAAA
AACCTCACTG TCACGGTGGC GTCACTTGAC CCGTTTGGGC AGGGCGTAGC GCGTCACGAA
GGCAAGACGG TTTTTGTCAC AGGTGTGCTG CCGGGAGAGC AGGCCGAGGT GCAACTGACG
GAAGAGAAGC GTCAGTTTTC ACATGCCAAA CTTAAACGCC TGTTGACGCC TAGTCCGCAG
CGCGTTGAGC CGCAATGTCC TCATTTTACT CGCTGTGGCG GTTGCCAACA GCAGCATGCG
GAAATTACTC TGCAGCAGAG CAGCAAAACC GCAGCATTGA TGCGCCTGAT GACGCGAGAA
ACGGGCGTTG AACTGCCAGC CGCATCGCTG ATCGCTGGCA CACCTTATGC CTATCGGAGA
CGTGCGCGGC TTGCGTTATA CTTTCAGGCA AAAGAGCAGC GGCTATTGAT GGGCTATCGG
CAGCCCAATT CTCACGATCT GGTAGATATC AAGGCCTGTC CGGTATTGCG ACCAGAGCTT
GAAGCGCTGC TGCAACCGCT GCGCGAATGT CTGAGTCGAC TAAAAGCGGT GAAGCGTCTT
GGGCATGTGG AACTGGTGCA GGCGGAGAAC GGTCCGCTGC TGGTGCTGAG GCATCTTGAT
CCACTGCATC CATCGGATGA GCAGGCGTTG CGTGATTTTG CCCAGCAGCA GAGTGTCTCG
GTTTATCTGG CACCGGATGC CGACTCGTTG ACGTGCCTAC ATGGCGAAGA GCCGGTTTAT
CACGTCGCCG GGCTGACGCT GGCATTTAGC CCACGTGATT TTATTCAGGT CAATGACGCG
GTTAACCAGC AGATGGTCGC GCAGGCACTG GCGTGGCTGG ATGTACAACC GCAGGATAAA
ATATTGGACC TGTTTTGCGG TATGGGTAAT TTCACGCTGC CGCTGGCACA GCGTGCCGCC
AGCATTGTCG GTGTGGAGGG GGTTACCGCA CTCGTCGAGA AAGGGCGCGA AAATGCCCGG
CGCAATGCGT TGTCCAATGT CACATTTTTT CACCAAAATC TTGAGGATGA CGTCACACAG
CAACCGTGGG CGGCTCAAGG TTTTGATAAG ATATTACTTG ATCCGGCACG TGCAGGTGCG
GCAGGCGTGA TGGAGCAAAT AACCAGATTG GCACCGAAAC GGGTGGTGTA TGTTTCCTGT
AACGCCACGA CGCTAGCACG CGACAGTAAA GTATTACTCG CAGCCGGTTA CCGGCTGGCG
AATGTCGCAA TGTTGGATAT GTTTCCACAT ACCGGACACC TTGAATCGAT GGCACTGTTT
TTGCACGATT CCGGCACGCG GAAGGCTTAA
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| Protein sequence | MAQFYSPNRR VTTRKAVPAK NLTVTVASLD PFGQGVARHE GKTVFVTGVL PGEQAEVQLT
EEKRQFSHAK LKRLLTPSPQ RVEPQCPHFT RCGGCQQQHA EITLQQSSKT AALMRLMTRE
TGVELPAASL IAGTPYAYRR RARLALYFQA KEQRLLMGYR QPNSHDLVDI KACPVLRPEL
EALLQPLREC LSRLKAVKRL GHVELVQAEN GPLLVLRHLD PLHPSDEQAL RDFAQQQSVS
VYLAPDADSL TCLHGEEPVY HVAGLTLAFS PRDFIQVNDA VNQQMVAQAL AWLDVQPQDK
ILDLFCGMGN FTLPLAQRAA SIVGVEGVTA LVEKGRENAR RNALSNVTFF HQNLEDDVTQ
QPWAAQGFDK ILLDPARAGA AGVMEQITRL APKRVVYVSC NATTLARDSK VLLAAGYRLA
NVAMLDMFPH TGHLESMALF LHDSGTRKA
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